| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1529 |
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| Symbol | fadI |
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| ID | 4018002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1775842 |
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| End bp | 1777152 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637955539 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_562537 |
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| Protein GI | 91792886 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02446] fatty oxidation complex, beta subunit FadI |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.962111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACA GACAACAGGT AAAGAATGCT CGCGGCGAAC GAATCGCGAT TGTTGCCGGC
CTTAGAACGC CGTTTGCTAA ACAAGCGACA GCCTTTCACG GCGTCTCTGC CCTAGATATG
GGCAAAATGG TGGTTAATGA GCTGATTTCT CGCTCTGAAC TTGACCCTAA ATTAATTGAG
CAGTTGGTCT ATGGCCAAGT GGTGTTGATG CCAGCTGCGC CTAACATTGC CCGCGAAATT
GTCCTAGGCA CTGGCATGAA TGTGTCAACC GATGCTTATA GCGTGACCCG CGCTTGTGCG
ACCAGCTTCC AGTCTGCGGT TAACGTGGCT GAATCTATCA TGACTGGCAA TGTTGAAATC
GGTATTGCTG GCGGCGCGGA TTCTTCATCT GTATTGCCTA TTACCGTGTC TAAGAAATTA
GCCCATGCCT TGGTTGATTT GAACAAAGCC CGCACCCTAG GACAAAAATT TGCCATTATG
CGCCGCCTTG GCCTTAAAGA TTTAATGCCA GTGCCGCCAG CGGTTGCAGA ATACTCGACC
GGTCTTTCTA TGGGGCAAAC CGCCGAGCAA ATGGCGAAAA CTTACGGCAT TAGCCGCGCA
GACCAAGATG CATTAGCTCA TCGCTCACAC ACGCTAGCCA CCGAAACATG GAATTCAGGT
AATCTTCGTG ATGAGGTGAT GACGGCTCAT GTTGCCCCTT ATAAGCAGTT TATTGACCGC
GATAACAACA TCCGCGAAAA CTCTGTACTT GAATCGTACG CTAAGCTTCG CCCTGCGTTT
GACCGTAAGC ACGGCAGCGT GACAGCGGCA AACAGTACGC CGCTGACCGA CGGTGCATCA
GCCATCATAT TGATGAGTGA AGGCCGTGCT AAAGCCTTAG GTTACCAGCC AATTGGCTAT
ATCAAGAGTT ATGCTTTTAC CGCCATTGAT GTATGGCAAG ACATGTTGAT GGGCCCATCT
TACGCGACGC CATTGGCGCT TAAGCGTGCC GGTATGGAGC TTGAAGACTT AACCTTGATT
GAAATGCACG AAGCGTTTGC CGCGCAAACC TTAGCCAACA TGCAAATGTT TGGCTCGAAG
AAGTTTGCCG CTGAAAAACT CGGTCGTAAT CGCGCAATCG GTGACATCGA CATGAGCAAA
TTTAACGTCC TAGGCGGCTC GCTTGCCTAC GGTCACCCCT TTGCAGCCAC AGGTACCCGT
CTTATCACCC AAGTGTGTCG CGAGCTTAAA CGCCGCGGCG GTGGTACTGG TTTAGCCACA
GCCTGTGCGG CTGGTGGTTT AGGCGCAGCA ATGATAGTTG AAGTGGAGTA A
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| Protein sequence | MSDRQQVKNA RGERIAIVAG LRTPFAKQAT AFHGVSALDM GKMVVNELIS RSELDPKLIE
QLVYGQVVLM PAAPNIAREI VLGTGMNVST DAYSVTRACA TSFQSAVNVA ESIMTGNVEI
GIAGGADSSS VLPITVSKKL AHALVDLNKA RTLGQKFAIM RRLGLKDLMP VPPAVAEYST
GLSMGQTAEQ MAKTYGISRA DQDALAHRSH TLATETWNSG NLRDEVMTAH VAPYKQFIDR
DNNIRENSVL ESYAKLRPAF DRKHGSVTAA NSTPLTDGAS AIILMSEGRA KALGYQPIGY
IKSYAFTAID VWQDMLMGPS YATPLALKRA GMELEDLTLI EMHEAFAAQT LANMQMFGSK
KFAAEKLGRN RAIGDIDMSK FNVLGGSLAY GHPFAATGTR LITQVCRELK RRGGGTGLAT
ACAAGGLGAA MIVEVE
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