| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1511 |
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| Symbol | |
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| ID | 4017390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1757928 |
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| End bp | 1759001 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955521 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_562519 |
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| Protein GI | 91792868 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTAA CTAAGATACG TTCAGGGTTT AGGCTAATAT CCCTGATATC CTTGATAGCC
CTTTTAGGGG GCTGTGAGAA GGCACAATCA GATACCCTAG TCGATGCCAG CACCCCAGTT
AAGTTAATGG AAATTCCTCA ACTCAAGCAC AGCAAAACCC ACCAGTTTGT GGCGCAAGTC
AGTGCCAGTA AGCAAGCTCA ACTGGCGTTT CAAGTGCCAG GGGAAATCGC TTTGCTAGAT
GTGCGTATGG GTCAAAAAAT AGAGCAAGGC CAACTACTTG CTAAGCTAGA TCAACAAGAT
TACTTACTGG CTTTAGCGGC GATGCAAGCC AATTTTGAGC TACAACAAGC CAGACTTAAG
CGCGCAAGAC AGCTATTTGA GAAGCACTTA GTCAGCGAAG ATAGTCTAGA TCAAACTCAA
ACTGCCTATA CCGAGGCTAA GCTCAATTTG CAGCAGGCAC AAACGGATTT ATCTTACACT
GAATTGCATG CGCCTTTCCC TGGGGGGATA TCCATCACCC ATGCCAAAAC CTACCAATTT
GTGGATGCTA AACAAGCCGT TGTTAGCATG CTAAATAACC AAAATTTTGA TATCGATTTT
AACTTGCCTG TGCACCTTAC CTCAGAGCTG GATATTGATA GTTTGAAACA AAGTAGTCTC
AAAGTGCGTT TGAGTCGTTT CGATAACGTG TTGCTACCCG CAAGCTTCAA AGAAATCTCC
ACTAAACCCG ATGTGGATAC CAACTCCTAC AAAGTTACCC TGACCATTAG TCGTCCAGCC
AATTTGAATA TTTTGTCTGG CATGTCGGGC ACAGTGCATA TAGTACAAAC GCTCGCCAAG
CAACAAGACT TGTTCCTCCC TCTTGGTGCT ATCTATAGCC AAGAGAAGGC GCTTGCCCAA
GTCTGGCGTA TGAATGAGAC CAACCAACTG CTCGAACCTG TCACTGTGGT GTTAGATGCT
GATAATAGAG TCGTCAGTGG CCTAACGCCT GGGGATAACA TAGTGATTGC AGGCGCTAAA
AACCTTAACG CCGGCCAGAA AGTACGCCCA TGGGTTAAAG AGGGAGGAAT TTAA
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| Protein sequence | MPVTKIRSGF RLISLISLIA LLGGCEKAQS DTLVDASTPV KLMEIPQLKH SKTHQFVAQV
SASKQAQLAF QVPGEIALLD VRMGQKIEQG QLLAKLDQQD YLLALAAMQA NFELQQARLK
RARQLFEKHL VSEDSLDQTQ TAYTEAKLNL QQAQTDLSYT ELHAPFPGGI SITHAKTYQF
VDAKQAVVSM LNNQNFDIDF NLPVHLTSEL DIDSLKQSSL KVRLSRFDNV LLPASFKEIS
TKPDVDTNSY KVTLTISRPA NLNILSGMSG TVHIVQTLAK QQDLFLPLGA IYSQEKALAQ
VWRMNETNQL LEPVTVVLDA DNRVVSGLTP GDNIVIAGAK NLNAGQKVRP WVKEGGI
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