| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1505 |
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| Symbol | |
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| ID | 4017384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1746729 |
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| End bp | 1748570 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955515 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_562513 |
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| Protein GI | 91792862 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCCTC GTTTATTGTT GCTGTGTTTT TGGCTAATAC TGGCCCCTTT GGTGTCTTTT
CCAGCCTTTG GTGACAACAC TTGGTTGAGC ATTAAGGTGA CTGGAGTCAA GGGCAAGTTA
GCCCGTAATA TCCGCGCTCA TCTTGGCGCC GATCCTGAAT CCGATGTGCA GCGCCGAGCC
TACCTTTTTA CCGCAGAAGA TAACATCACC GCCGCCCTCG AATCCTTAGG CCGCTACCAT
AGTAGTGTGG AGCTGACGGT TATCGAATCA GACTCTGAAC CTTGGCAACT GCAAATAGCT
GTTACTCCAG GTGAACCTAC CTTAGTGCAA TGGGTTGATA TCCAATTCAG TGGTGAGATG
CGCAGCGATG ATGCCTTTAA TTTGTGGCTC GATAGCATCA CATTACTGCC CGGAGACACA
CTCAATCATG GCCGTTATTT GGAGATTAAA TCTCAACTCA CTACCTTGGC TCTCACCCGT
GGCTATTTCG ATGCCGAGTA CACCCTGGCT GAAATTCAAG TCAATCGTGA TCTCAATAGT
GCTAGAATCA GCCTGCATTT TGATTCAGGT AAGCGTTATC AATTCGATGA AGTGACCTTT
AGCGGCCACA GCCTAGATGA TGATTTACTA CAAACACTCG TCCCCTTCGA CGCCGACATG
CCCTACGCCA GTTCGCAACT GTCTGCCCTA CACAGAAACC TGCTGGACTC AGGTTATTTC
AGTAGCATTA AAGTGCTGCC ACAAATTGAT AAAATTCATG ACAACTTAGT GCCCATCAAG
GTCGAACTCA CAGACAGAAA CAGCCACTCT TTTGAGGTCG GTGTGGGTGC AGACATAGGC
AACACCAGTG AAAAAAGCGT CGAGCCTAGA GTGAGATTCA CCTGGCGCAC ACCGCAAATT
AATCACTTGG GTCACAGTCA AGAAACCAGT TTGGAGTGGT CTCCTGACAG ACCTAAGTTC
TTAACCACCT ATTCCATCCC ATTAACCCAT GTGTTGAACG ATAAACTCAA TATCAGGCTA
GGATTACTAC GGGATAAATA CGGTGTCACT CAGGACTACC TACCCACAGA GAAAACCTTT
GCTAACACAG GCCAGCTTGA GTCAAGCAAG CAATTGTTTG GCTTAGTTAG GCAGCAAAAG
CTTGATAATC AGTGGTTGTG GAGTTATTCA CTCGAAGCGG TTCATGAAGA ATATAATCAA
TTAAATCAGG ACTTCAACCC AAAAATCTAC TTACTTGGGA TGGGGTTTAG CCGCAGTCTA
CGGGGTGACA ATAGCTTAGA CCCTAAATCA GGATTTAGGC AGATTTACCA CATAGAGCAT
GCCGATGGGA GCTTAGGTTC CAGCTTAAGT CTCACCCGCC TGCAGAGCCG TTTCAAGTGG
ATAGATACCC TATTTGATAA CCACAGGTTC GTTGCCAGAC TCGATTTAGC CGCCAACCTT
GCCGACACTG AAGACATGGC CAACATACCG CCATCATTGC GGTATTTTGC CGGTGGCGAT
CAGAGTATTC GCGGTTATGG CTACCAAGAA CTGGGCCCAC ATATCGAATA CACCAATGCA
GAAGGCGGAA CCTCCCGCCA AGTGGTTGGC GGACGCTACC TCGCGGTAGC AAGTGTTGAA
TATCAATACT ACCTGACTCC CACATGGCGA CTGGCAAGCT TTATCGATGG TGGCAATGCC
TTCGATACCA AGCAATTTGA TCCCGTGCTG GCTGTGGGTA GTGGTGTGCA CTGGATTTCA
CCTATCGGCC CTATCAAGCT CGATTTAGGC GTCGGCTTAA AAGAAACCGA CACTGTCGCT
CGCTCATGGC GTATTCATCT CACCATGGGA ACTGAGCTAT GA
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| Protein sequence | MSPRLLLLCF WLILAPLVSF PAFGDNTWLS IKVTGVKGKL ARNIRAHLGA DPESDVQRRA
YLFTAEDNIT AALESLGRYH SSVELTVIES DSEPWQLQIA VTPGEPTLVQ WVDIQFSGEM
RSDDAFNLWL DSITLLPGDT LNHGRYLEIK SQLTTLALTR GYFDAEYTLA EIQVNRDLNS
ARISLHFDSG KRYQFDEVTF SGHSLDDDLL QTLVPFDADM PYASSQLSAL HRNLLDSGYF
SSIKVLPQID KIHDNLVPIK VELTDRNSHS FEVGVGADIG NTSEKSVEPR VRFTWRTPQI
NHLGHSQETS LEWSPDRPKF LTTYSIPLTH VLNDKLNIRL GLLRDKYGVT QDYLPTEKTF
ANTGQLESSK QLFGLVRQQK LDNQWLWSYS LEAVHEEYNQ LNQDFNPKIY LLGMGFSRSL
RGDNSLDPKS GFRQIYHIEH ADGSLGSSLS LTRLQSRFKW IDTLFDNHRF VARLDLAANL
ADTEDMANIP PSLRYFAGGD QSIRGYGYQE LGPHIEYTNA EGGTSRQVVG GRYLAVASVE
YQYYLTPTWR LASFIDGGNA FDTKQFDPVL AVGSGVHWIS PIGPIKLDLG VGLKETDTVA
RSWRIHLTMG TEL
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