| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1504 |
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| Symbol | |
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| ID | 4017383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1742665 |
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| End bp | 1746732 |
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| Gene Length | 4068 bp |
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| Protein Length | 1355 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955514 |
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| Product | hypothetical protein |
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| Protein accession | YP_562512 |
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| Protein GI | 91792861 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCATG AGAGCCCCAA TCTGCCAGAA GAAACCTGCG CCTTAATTGA CACTCATGCC
TCGGACAACA AAAACCTTGC CGCATCGAGT AAGCCTAAGT TACACAAAGC ATTCGCTAGG
CTGCTGAAAT GGCTCAAACA CAGCCTAAGA TTAAGCCTAT ATTTACCCTT GGCACTGCTT
ATGCTTTTGG CCCTAATGCT CGGCACGCCC ATGGGCAGCC ATGGGGCGAT TATTTTAGCC
AATAACTTAG TGGCGGATCT TGAGCTTGAA TACCTGTCAG GCACATTAAA CCGTGAAATT
AGCCTGTCTC ACGCCAGTTA TCGACTCTAT GAGCTGAGTA TTGAAGCCAG AGGCATCACC
TTTGGCTGGC AACCTAGTTG CTTGCTTAAT TGGCAAGTGT GCATCCAAAA TCTTAGCGCT
CAAGCTGTGA GTGTCAGCTA CCAAGACTCA GCCCAAGATC CATCCGCGGC TGTGGTTGAC
AGCTATGATG AGCACCAAGA GCCAGAGCAG CAAACACTGC TAGACACTGT CTATGCTGCC
TTTGAGATGC CCATGGCCAT ATTGTTAAGT CACACTAGCC TTAAGAAAAT TGAAGTCAAG
ATCAATGATA TGGACTTTAA GGCCGATGAA GTCAGTGGCA CCGCCATTTG GAACTCTTCA
GGATTAACCG TTCGCCTCCT AGAAAGTCAG GGGCTGGATG TGTCTATTCC TCAAACCACT
GCCAATACAC CAAGTCCAAG CATTGAAGGT TTAGAAGATT TAAGCCAGTT TGCCTTAACC
GACTTACCAC AAATCACCTT GCCGTTCCCT ATCCGGGTAA AGCGTTTTAT CGCAACTCAA
AGCTTGTTAA CCTTAGGCGA GCGCCAAGAC AGTTTCTCTC ATATTGAACT TAAAGCCAGC
ATGAAGGACT CGCTACTCAG AGTCAGTGAC CTGCAACTCA GCTATGCTGA GGCTAGCGCG
GTATTAACAG GTCAGCTGGC GTTTAGCGCT AACTATCCGC TGGAGTTCAA CCTAGCTCTC
AATATACCCC GTCTTAGCGA GTTCCCAGGG CTTGCTGATC AAAAAATCAA TTTAGGGTTT
AGCCAAGATT TAAGTAACCT CAAACTGCAG GCTCAAGGTC GAGGTCAAAG CGAGTTTAAT
CTGCAAGCCG ATATAGCCCT CACCTCAGAC ACGTTAGACT ACCAACTCAG CCTGACAGAC
AGTAAGCTGC AGTGGCCATT ATCAGCCCCC CAATACCACG GGAATATTGA GGCGCTAATG
TCCTCTGGCA ACATTCATAG CCAGCAGCTA AGCCTGCTTG GTGACATCAC AGCTAAGCTT
AAAGACAAAG TGAATGATAA GATTAACGAC ACAAAAAGTA CTGTCACTAT CCCAAACTCA
GCGGCTTTAC CAAGCTCAGA GAAACACCTA AGCTATACCC CCCCTGAAAG CGTGACCATG
AAGTTTGATA CTCAGCTTAA GCATCAAAAC CAAATGCTCA CAGTTCAGCA ACTGACAATG
TCATCCAACG CTGGGCAATT AAATGTCAGC GCTGAGGTCA ATTATCACAT TGGCCTACAA
GACAATTTAC AATGGCACGC GCTTCTCGGC ACTCAAGGGT TGCAATTACA GCAACTCTTG
CCCTTGATCC CAAATGAGCT ATTAAGCCCT GAACTTAGCC AAACCGTTAA CCTCACCACC
AGCATGATAA ATGGCAGCTT AACCACCCAA GGGGAAATGT CAGCCAAAGC ATGGCAAGTG
TCTGTGACCC AAGCCAACTT AAGTGGCAAT GTGAATGGCT ACCCACTTTA TATTACGGGT
GATATTAGTG CCGATAGTCA GTTTAACCTC CAAGCGAACG CGCTAGAAGC TCAGGCCCTA
GGTGCAAGCC TAAGTGTCCA CGGTGAAGTG AAGGATCAAT GGGATGTGAA GGCTAAGCTC
GATGTGCCCG ATATCAGCCA ATGGCTAAGC TACGCCAGAG GCAGCATAAC AGCCACAGCC
AATATCGGCG GCCCACAAGC GACCCCATTA CTGACGATGC AAACTGAATT AAGTCAGTTT
AGTGCCAAGG GCGCAAGCCT TGATTATGTG CAGCTTTTAG GCAGTTATTC CCCTAAAGAG
GCTCATCAAT TTACCTTGAA ACTCACAAAC AATTTACTGA ACTGGAAAAA ACATCAAGTA
ACCAACGTGA GCCTGTTAGC CCAAGGGGAT ATTAGCCAGC AAAGCCTGAC AATAAGCTCC
GAAGGCGAAC TTGCTATTAA AGGCGAATTA AACAGTCAAT ATCAACAGTT AACAGACGCC
TTCAGCGCCG AACTCGCGCG CCTTAGCATC ACCACCAAAG TTGGCCAATG GCAACTCAAT
AATCCCGCTA AACTAGAATG GCAACAAGGT AAAGGCAGCA TCAGTCCCTT TTGTTTACAG
CACCCACAAA GCCGACTTTG CCTGGTTGAC CCTATCAATA TCGGTAAGCA AGGCCAGCTT
AATTTGGCCT TCAGTGGCAA TCCGGGTCAG TTACTGGCAC CTGTGCTATC CAAAAAGATG
CGTTGGGATG GCGAGGCAAC ACTGGCAGCT CAAGTGCATT GGCGTGAAGG CACTCGGCCA
ACGGCTAAAC TCGATTTTGC ATTACTGCCA GGCAATATCA CCTTAATTCG TGCCAAAAAT
AACCTCATTA GCCTTGATTA TCAAACATTT AATCTCGCGG CTCAGCTGGA TGAAAAGGCA
CTTTCAGGCC AAATTGGCAT TAACTCTGAA GGCATAGCCC AATTTCAAAG CCAGTTCAGT
ATCGCTAATG ATGAGCAGAG AAGCTTGAGC GGCGAGATAG ACGTCAATCA TTTAAACCTG
CAACCTTTTG GGGAGTTTTT CCCCCAGCTT GCCACCCTTG AAGGTGTTAT TTCCACTAAG
CTCTTACTCG CTGGCACCTT AGCCGAGCCA GATATTTCTG GCAATATTCG CCTCGTCGAT
GGCGCTGTTG CCCTAGCCAG TAACCCGACG CTAATGGACA AAATTTACCT AGACTTGGCC
TTATCCGGTC AACAAGGCAA CTTATCTGGC CACTGGTTTA TGGGTAAAGG CGAAGGCAAG
GTGCTAGGCA CACTGAGTTG GCCTCAAGGT CAATTTAGCG GAGAACTCGC CATTGCAGGT
GACTCCTTAG CCTTTATTCA GCCACCGCTG GCCATTTTAG ATGTGTCACC GGCAATAAAC
CTCAACTTTA ATCGCCAGAA ATTGTCTGTC ACGGGTGATA TCAATGTACC GTCGGGACAG
ATAAAGATAG TCCCACTGGC GGATGGCGGC GTTCCTGTCT CCACGGATGT GGTGTTTAAT
GACTCCATTT CGGCCCAAGA AATTAAAACC AGTCCTTATG CCATCATTGC CGATCTGAAT
ATCAGTGTCG GCAAAGGGGT ATTGATCGAT GGCTTAGGTT TAACCGGTAA GCTAGGTGGT
AAGCTAGTAT TGAAACAAAA AGCCTTCAAA CCACCACTGC TCTATGGCGA TATCAAGATC
CGCCAGGGCA GCTATCGTTT TATGGGCCAG AGCTTAAAAA TAAGTACAGG TGAAGTGCAA
TTTGTCGGCT CGGCTGAAAA TCCTAACCTT AATATTCAAG CGGTGCGACA AATTAAAGAT
GAAGATCTCA CCGCAGGTGT GAGGATCACT GGCACCCCAC TAAGGCCAGT GGTCACCTTA
TTTTCAACTC CCGCCAAGGA GCAAGCAGAA ATACTGTCGT ACATTCTCAA AGGCACAGGT
TTTACTAACA GTAACAATCA GCAGAACAAT GCCTTAATGA TGAGTGCAGC CCTCAGTTTA
GGTTCACAAT TCGATGGCGG TGCCATCAAT AGCTTAGGCA GTACTGCCTC AGGATTAATT
GAGAAATTTG GCTTTAGCAA TGTACAACTC GATGCCAATG ACGAAGGCCG AGTCGCCCTC
AGTGGCTATA TTGGCGAAGA TTTGATGGTG AAATACGGCA TGGGCGTCTT TAATCCCGGT
TATGAAATGA CGGTCAGGTA TTACTTATTG TCTCAGCTCT ATCTAGAAAC CGTATCAGGC
ACCTTAAGCC AGTCGCTGGA TCTCTACTAC AGTTTCGACA TAGAGTAA
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| Protein sequence | MSHESPNLPE ETCALIDTHA SDNKNLAASS KPKLHKAFAR LLKWLKHSLR LSLYLPLALL
MLLALMLGTP MGSHGAIILA NNLVADLELE YLSGTLNREI SLSHASYRLY ELSIEARGIT
FGWQPSCLLN WQVCIQNLSA QAVSVSYQDS AQDPSAAVVD SYDEHQEPEQ QTLLDTVYAA
FEMPMAILLS HTSLKKIEVK INDMDFKADE VSGTAIWNSS GLTVRLLESQ GLDVSIPQTT
ANTPSPSIEG LEDLSQFALT DLPQITLPFP IRVKRFIATQ SLLTLGERQD SFSHIELKAS
MKDSLLRVSD LQLSYAEASA VLTGQLAFSA NYPLEFNLAL NIPRLSEFPG LADQKINLGF
SQDLSNLKLQ AQGRGQSEFN LQADIALTSD TLDYQLSLTD SKLQWPLSAP QYHGNIEALM
SSGNIHSQQL SLLGDITAKL KDKVNDKIND TKSTVTIPNS AALPSSEKHL SYTPPESVTM
KFDTQLKHQN QMLTVQQLTM SSNAGQLNVS AEVNYHIGLQ DNLQWHALLG TQGLQLQQLL
PLIPNELLSP ELSQTVNLTT SMINGSLTTQ GEMSAKAWQV SVTQANLSGN VNGYPLYITG
DISADSQFNL QANALEAQAL GASLSVHGEV KDQWDVKAKL DVPDISQWLS YARGSITATA
NIGGPQATPL LTMQTELSQF SAKGASLDYV QLLGSYSPKE AHQFTLKLTN NLLNWKKHQV
TNVSLLAQGD ISQQSLTISS EGELAIKGEL NSQYQQLTDA FSAELARLSI TTKVGQWQLN
NPAKLEWQQG KGSISPFCLQ HPQSRLCLVD PINIGKQGQL NLAFSGNPGQ LLAPVLSKKM
RWDGEATLAA QVHWREGTRP TAKLDFALLP GNITLIRAKN NLISLDYQTF NLAAQLDEKA
LSGQIGINSE GIAQFQSQFS IANDEQRSLS GEIDVNHLNL QPFGEFFPQL ATLEGVISTK
LLLAGTLAEP DISGNIRLVD GAVALASNPT LMDKIYLDLA LSGQQGNLSG HWFMGKGEGK
VLGTLSWPQG QFSGELAIAG DSLAFIQPPL AILDVSPAIN LNFNRQKLSV TGDINVPSGQ
IKIVPLADGG VPVSTDVVFN DSISAQEIKT SPYAIIADLN ISVGKGVLID GLGLTGKLGG
KLVLKQKAFK PPLLYGDIKI RQGSYRFMGQ SLKISTGEVQ FVGSAENPNL NIQAVRQIKD
EDLTAGVRIT GTPLRPVVTL FSTPAKEQAE ILSYILKGTG FTNSNNQQNN ALMMSAALSL
GSQFDGGAIN SLGSTASGLI EKFGFSNVQL DANDEGRVAL SGYIGEDLMV KYGMGVFNPG
YEMTVRYYLL SQLYLETVSG TLSQSLDLYY SFDIE
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