Gene Sden_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1503 
Symbol 
ID4017272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1742231 
End bp1742518 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content42% 
IMG OID637955513 
Product50S ribosomal protein L25 
Protein accessionYP_562511 
Protein GI91792860 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.50218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTACA CTATCCAAGC ACAAATTCGT ACTGAAATCG GGAAAGGTTC GAGCCGCCGC 
CTACGTCATG CGAACAAAGT TCCAGCTGTT ATCTATGGCC CAGGTAAAGA GCCAATGGTT
ATCGTTTTTG ACCAAAAAGA TATCATCAAT ATTCAAGCTA ATGCTGATTT TTACACTTCT
GACGTTACCC TAGTTGTTGA CGGTAAAGAT GTAAAGGTTC GTGCTAAAGC CATGCAACGT
CATGCTTTCA AGCCACTGAT CGAACACGCA GATTTCATGT TTGTTTAA
 
Protein sequence
MSYTIQAQIR TEIGKGSSRR LRHANKVPAV IYGPGKEPMV IVFDQKDIIN IQANADFYTS 
DVTLVVDGKD VKVRAKAMQR HAFKPLIEHA DFMFV