| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1497 |
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| Symbol | |
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| ID | 4017266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1735495 |
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| End bp | 1737984 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955507 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_562505 |
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| Protein GI | 91792854 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAC GCGATTTTAT GAAAGCCAAT GCGGTGATCG CTGCGGCAAG TGCAGCCGGC
TTAGCGCTTC CCGCCGGTGC CAGTAACTTA ATTACCAGCT CAGAGCAAAC CAAGCTTGAG
TGGAATAAAG CCCCATGCCG TTTTTGCGGT ACAGGTTGCT CTGTGATGGT TGCGACTCGA
GAGGGCAAAG TGGTCGCAAC CCATGGTGAT GCCAATAGCG AAGTCAACCG CGGCCTTAGC
TGCATTAAAG GATATTTCCT CTCGAAAATC ATGTATGGCC GCGATCGCTT GACTTCACCT
ATGCTACGCA TGACAGACGG CAAGTACGAT AAGCACGGTG AGTTTACCCC GGTTTCTTGG
GAAAAAGCCT TCGATACTAT GGCTGAGCGT TGGAAAGCCA CGATCAAGGA GAAAGGCCCA
ACCGCGGTTG GCATGTTTGG CTCAGGCCAG TGGACGGTAT GGGAGGGCTA TGCTGCGGTT
AAGCTGATGA AAGCAGGCTT TGGCACAAAC AACATTGACC CTAATGCCCG TCACTGTATG
GCATCTGCGG TAGCAGGTTT TATGCGCACC TTTGGTATTG ATGAGCCTAT GGGTTGCTAT
GATGACATGG AAGCCGCCGA TGCCTTTGTG CTTTGGGGCT CTAACATGGC CGAGATGCAC
CCTATTCTTT GGACCCGGGT TACAGACAGA CGCCTGAGTG CACCCCATGT GAAAGTGGCG
GTGTTGTCGA CTTTTGAGCA CAGATCCTTC GATCTTGCCG ACTTGCCTAT GGTATTCCAT
CCGCAGACAG ATTTAGCCAT CTTAAACTTC ATCGCTAACT ACATCATTCA AAACAACAAG
GTCAATTGGG ATTTTGTTAA TAAGCATGTG AATTTCCGTA AAGGCACCAC AGACATTGGC
TATGGTTTGC GTCCGGCGCA CCCAACCCAA ATGAAGTCTA AAAATGCCGC CACGGCCAAC
GACTCAACCC CAATCGATTT CGAGCAGTTT AAAAAGTTTG TTGCCGATTA CGATGTCGAG
TCAGTGAGTA AGCTCTCTGG TGTACCTGAG CATAAACTGC TTGAGCTTGC TGAGCTGTAT
GCGGATCCCA AAGTCAAAGT GACCTCATTT TGGACCATGG GGTTCAACCA GCATACTCGC
GGTGTCTGGT GTAATAACCT GATGTATAAC ATTCACTTAC TGGTAGGTAA AATTTCTACA
CCAGGCAATA GCCCGTTCTC ATTGACTGGT CAGCCCTCGG CGTGCGGTAC TGCCCGTGAA
GTGGGTACCT TCTCTCATCG TCTGCCTGCG GACATGGTGG TGACAGATCC AAAGCACAGA
AAAATTGCAG AAAACATTTG GAAGATCCCA AGTGGCATTA TTCCAGAGAA ACCCGGTTAC
CACGCGGTGG AGCAGAGCCG TCGACTTAAA GATGGCGATC TAAATTGTTA CTGGGTGCAA
GTGAATAACA ATATGCAGGC AGGGCCTAAC ATCAACGAAG AAGGCCTGCC TGGGTATCGC
AATCCGGCTA ACTTCATCGT AGTCTCAGAT GCTTATCCGA CTGTGACGAC ACAAGCCGCT
GACTTAATCT TACCTACCGC CATGTGGGTC GAAAAAGAGG GCGCCTATGG TAATGCTGAA
CGCCGCACTC AGTTTTGGCA TCAAATGGTA AAGGCGCCAG GGGAGTCAAA ATCTGATCTT
TGGCAATTGA TGGAGTTCTC AAAGCGCTTC ACTACCGATG AAGTTTGGTC AAAAGCTGTG
TTAGATGCCA ACCCTAAATA CAAAGGTAAG ACACTGTTTG AGGTTCTGTT CAAAAACGGT
CAAGTAGATA AGTTTCCGTT AGCGGATGCC GATCCTAAAT ACATGAACGA TGAGAACGAT
GCTTTCGGTT TTTATGTACA AAAAGGCTTA TTTGAAGAAT ACGCGACCTT TGGCCGTGGT
CATGGTCACG ATCTAGCCGA TTTTGATACC TACCATAAAG AGCACGGTCT TCGCTGGCCT
GTGGTGGATG GCAAGGAAAC TAAATGGCGC TTCCGTGAAG GCTCAGATCC TTATGTTAAA
GCGGGCACAG GTTTTGAATT CTACGGTAAG CCCGATGGCA GAGCGGTTAT TTTTGCACTG
CCCTATGAGC CTGCGGCAGA AGCGCCAGAT GAAGAGTTCG ACATGTGGTT GTCCACGGGT
AGGGTGCTTG AACATTGGCA TTCAGGCTCT ATGACACAGC GAGTGCCCGA GCTTTATAAA
GCCTTCCCTG ATGCTGTGTG TTTTATGCAC CCAGATGATG CCAAGAAGCG TGGCCTGCGC
CGTGGGGATG AAGTCAAAGT CATGTCTCGG CGCGGTGAAA TTAAGACCCG TATCGAGACT
CGCGGGCGCA ATAAACCCCC CGTGGGCTTA GTATTTGTTC CTTGGTTTGA TGCAAGTCAG
CTCATTAATA AAGTCACCTT AGATGCAACA GATCCCATTT CTAAGCAAAC CGACTTTAAA
AAATGTGCCG TTAAGGTAAT CAAGGCCTAA
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| Protein sequence | MNRRDFMKAN AVIAAASAAG LALPAGASNL ITSSEQTKLE WNKAPCRFCG TGCSVMVATR
EGKVVATHGD ANSEVNRGLS CIKGYFLSKI MYGRDRLTSP MLRMTDGKYD KHGEFTPVSW
EKAFDTMAER WKATIKEKGP TAVGMFGSGQ WTVWEGYAAV KLMKAGFGTN NIDPNARHCM
ASAVAGFMRT FGIDEPMGCY DDMEAADAFV LWGSNMAEMH PILWTRVTDR RLSAPHVKVA
VLSTFEHRSF DLADLPMVFH PQTDLAILNF IANYIIQNNK VNWDFVNKHV NFRKGTTDIG
YGLRPAHPTQ MKSKNAATAN DSTPIDFEQF KKFVADYDVE SVSKLSGVPE HKLLELAELY
ADPKVKVTSF WTMGFNQHTR GVWCNNLMYN IHLLVGKIST PGNSPFSLTG QPSACGTARE
VGTFSHRLPA DMVVTDPKHR KIAENIWKIP SGIIPEKPGY HAVEQSRRLK DGDLNCYWVQ
VNNNMQAGPN INEEGLPGYR NPANFIVVSD AYPTVTTQAA DLILPTAMWV EKEGAYGNAE
RRTQFWHQMV KAPGESKSDL WQLMEFSKRF TTDEVWSKAV LDANPKYKGK TLFEVLFKNG
QVDKFPLADA DPKYMNDEND AFGFYVQKGL FEEYATFGRG HGHDLADFDT YHKEHGLRWP
VVDGKETKWR FREGSDPYVK AGTGFEFYGK PDGRAVIFAL PYEPAAEAPD EEFDMWLSTG
RVLEHWHSGS MTQRVPELYK AFPDAVCFMH PDDAKKRGLR RGDEVKVMSR RGEIKTRIET
RGRNKPPVGL VFVPWFDASQ LINKVTLDAT DPISKQTDFK KCAVKVIKA
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