| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1490 |
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| Symbol | |
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| ID | 4017259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1727371 |
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| End bp | 1728885 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955500 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_562498 |
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| Protein GI | 91792847 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00163594 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGGTA TCGTCGGAAT AGTAGGCAAG ACATCGGTTA ATCAAACGAT TTATGATGCA
CTCACAGTAC TTCAACATCG TGGTCAAGAT GCTGCAGGTA TAGTTACAGT GGATCATCAA
GCATTTCGTT TACGTAAAGC CAATGGCCTA GTGAAGGACG TATTTGAACC TAAGCATATG
CAGCGACTGC AAGGTAATGC TGGCATAGGC CATGTACGTT ATCCCACAGC AGGCAGCTCC
AGTGCCTCTG AAGCCCAACC TTTTTATGTT AACTCCCCCT TTGGGATTTC ATTGGCCCAT
AACGGCAATC TCACTAACAC AGTAGAACTT GCTGAAGGCT TAGTAAAAAA GCGCCGTCAT
GTGAATACCA CGTCCGACTC AGAAGTATTG CTCAACCTAT TAGCCGATGA GCTGCAAGAG
ACTCGCAGCT TGACCTTAAG CGCCGATGAG GTGTTTGATG CTGTGGCTAA AGTCCATGGG
CAAACTCGCG GCGCTTATGC GGTTGTGGCG ATGATTATAG GCCAAGGCCT AGTGGCATTT
CGCGATCCTT TCGGTATTCG TCCGTTAATC TTAGGCAAGC ACGAGAGTGC CACCGGTACT
GAGTACATGG TAGCCTCTGA AAGTGTGGCA CTGGATGCGG TTGGCTTTGA AGTGATGCGT
GATGTAGCGC CTGGCGAGGC GATTTTTGTC ACCTTAGATG GCCAGTTGTT TACCCGTCAG
TGCGCCATAG ATCCTAATTA TGCGCCTTGC ATATTTGAAT TCGTGTATTT TGCGCGCCCA
GATTCCACCA TAGATAAAGT GTCTGTGTAT GCCAGCCGGG TGAACATGGG GGCAAAGCTA
GGTGAAAAAA TCAAGAAAGA GTGGGAAGAT CATGACATAG ATGTGGTTAT TCCTATTCCT
GAAACCTCTT GCGATATCGC TTTAGAAATT GCCCGCTGCA TGAATTTACC TTACCGCCAA
GGGTTTGTGA AAAACCGCTA TATTGGCCGT ACCTTTATTA TGCCGGGGCA AGAAGAGCGG
ATTAAATCGG TGCGCCGTAA ACTCAATGCG ATAAACACTG AGTTTAAGGG TAAAAACGTA
TTATTAGTGG ATGACTCTAT CGTACGCGGT ACCACCTCTG AGCAGATCAT CGAAATGGCG
CGTGAAGCCG GTGCCAATAA AGTGTATTTC GCCTCGGCAG CCCCAGAAGT TCGCTTCCCG
AACGTCTATG GAATCGATAT GCCGACCTCC AATGAGCTGA TAGCTTATGG CCGTGACGCC
GATGAAATCG CGAATATTAT CGGTGCAGAT GGGATAATCT TCCAAAACCT GACTGACTTA
GTCGAAGCAG TGCGGATGGA GAACCCTGAA ATTAAGCAGT TCGATACTTC GGTATTCGAT
GGCCACTACA TTACCAACGA TGTCGACCAA AGCTATTTGG ATCACCTGAC GCAATTGCGT
AATGATGATG CCAAGTTAGG CCGTAGCAAA GATATTGGCA CTAACCTTGA ATTGCACAAT
GTGTGTCATC CTTAA
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| Protein sequence | MCGIVGIVGK TSVNQTIYDA LTVLQHRGQD AAGIVTVDHQ AFRLRKANGL VKDVFEPKHM
QRLQGNAGIG HVRYPTAGSS SASEAQPFYV NSPFGISLAH NGNLTNTVEL AEGLVKKRRH
VNTTSDSEVL LNLLADELQE TRSLTLSADE VFDAVAKVHG QTRGAYAVVA MIIGQGLVAF
RDPFGIRPLI LGKHESATGT EYMVASESVA LDAVGFEVMR DVAPGEAIFV TLDGQLFTRQ
CAIDPNYAPC IFEFVYFARP DSTIDKVSVY ASRVNMGAKL GEKIKKEWED HDIDVVIPIP
ETSCDIALEI ARCMNLPYRQ GFVKNRYIGR TFIMPGQEER IKSVRRKLNA INTEFKGKNV
LLVDDSIVRG TTSEQIIEMA REAGANKVYF ASAAPEVRFP NVYGIDMPTS NELIAYGRDA
DEIANIIGAD GIIFQNLTDL VEAVRMENPE IKQFDTSVFD GHYITNDVDQ SYLDHLTQLR
NDDAKLGRSK DIGTNLELHN VCHP
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