Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1488 |
Symbol | |
ID | 4017257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1726028 |
End bp | 1726726 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637955498 |
Product | sporulation related |
Protein accession | YP_562496 |
Protein GI | 91792845 |
COG category | [S] Function unknown |
COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000050806 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCAGTC AATTTCAAAA TAGATTAGTG GGCACCATAG TCTTAGTGGC GTTAGGGGTA ATTTTTTTAC CTGATTTACT CGACGGAAAG CAACGTAAAG TGGAAGAAGT GTTTACCGAA ATTCCACTGC GTAGCCAAAG TCTGGCAAGA AATACGCAAG CAGAGTCAGA CCCGCAAGCT GAGCCGAGTC GAGGCGAGCA CTCCACCGTC GCTGCGGAGC AAGAGAAGTT TCAAGCTCTG AGTGCCGAGA GCACGCCTGC CCAGCAACAA TTGGAAGGCG CCTCACCACC GATCTCTAGC CTCAAGCCCA TTAAAATGGT CGATAGCTTA ACGGTCAGTG CCGCCGACAG CAAAAAATTG GCTCCAGCAG CGGTTAAATC GACTGAAAAA GCAAAAACAG CAGTGAAAAC TGTGAGTCGT CCCGAAGCCA GTCAGCCAAC AAGCCAGCCT CAGGCGAGTG TGACGCTGCA ACTGGGCGGG TTTAACAGTG CCGATAATGT GGTGGCTTTA GTGGCGCAAC TGCGTAAAGC TGGCTTTACA GCCTATACCT TGCCTCGTAA TCCTGTTGAT GGCCGTTTGA CCAAAGTGTT TGTTGGTCCC GATGTTTCTG AAGCTAAGCT GAAAATAAGG CAAGTTCAGA TAGAAAAGCT AACCGGGCTT AAGGGAAAGA TTGTTCCTTA CAATCCCCTT GAAAGATAA
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Protein sequence | MTSQFQNRLV GTIVLVALGV IFLPDLLDGK QRKVEEVFTE IPLRSQSLAR NTQAESDPQA EPSRGEHSTV AAEQEKFQAL SAESTPAQQQ LEGASPPISS LKPIKMVDSL TVSAADSKKL APAAVKSTEK AKTAVKTVSR PEASQPTSQP QASVTLQLGG FNSADNVVAL VAQLRKAGFT AYTLPRNPVD GRLTKVFVGP DVSEAKLKIR QVQIEKLTGL KGKIVPYNPL ER
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