| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1475 |
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| Symbol | |
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| ID | 4017712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1706898 |
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| End bp | 1707926 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955485 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_562483 |
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| Protein GI | 91792832 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATTAA TACAAGAAGC TTATGCCAAT GGTGCGCGCC TTTACAAGGC TTGTATTGAA
GCTGAGCTCA GTAAGCGTAC CTATCGACGT TGGTATCGAG CGGGTGTGGT GCAGGCTGAT
TTAAGGCCAA CAGCGTTTCG GCCAGAGCCC GCCAACAAGC TAAAAGAGCA TGAACGAGAG
CAGATATTAG CGGTATGCAA TGAGCCTGAA TATGCCAGCT TACCTCCCTC ACAAATAGTG
CCAACACTAT TGGATAAGGG GATTTATATT GCATCAGAGG CCAGTTTCTA CAGGGTATTA
GATGCCAATG ACCAGCTTAA CCATAGAGGT CGCAGCCAAG TTGCAGTTAA CCGCAGTAAG
CCACTTAGTT ACACGGCCGA TGGCCCAAAC CAAGTGTGGT CCTGGGACAT CACGTATCTG
GCCTCAGTAG TTAAAGGTCA GTTTTACTAC CTGTACATGT TTGAGGATAT TTACAGCCGA
AAAATCGTCG GTTATGAAGT CCATGAACAA GAATGTGGCG AGCGTGCCGC TGAGCTAATC
CAACGCAGCA TGCTACGGGA ACAATGCTTT AAAAAGCCAC TGGTGTTGCA CTCTGACAAT
GGTGCGCCAA TGAAGTCTCT GACGATGAAG GCCAAGCTTG AAGAGCTGGG TGTTACCGCT
TCACTGAGCC GGCCTAGAGT GAGTAACGAC AACCCCTATT CAGAGTCATT ATTTAAGACC
TTAAAATACC GTCCGCAATG GCCAAAATCA GGTTTTAGCA GTTTAGCCGC AGCAAGGGAA
TGGGTTGAGA AGTTTGTGAA GTGGTACAAC GATGAGCATA AACATAGCAA GCTTAACTTT
GTCTCACCAG GGCAACGTCA TGCGTTGCAA GATAGCGCTA TCTTAGACAA GCGAAAGAAA
GTTCTCGAAG CGGCTAAGGC AAGAAACCCC AAGCGTTGGT CCAAGGACGT TAGAAATTGT
GAGGCGGTTG GCCCAGTAAT GCTAAACCCA GATAAGGCAC CCGCAGACGA TGTAATAAAT
GCAGCTTAA
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| Protein sequence | MILIQEAYAN GARLYKACIE AELSKRTYRR WYRAGVVQAD LRPTAFRPEP ANKLKEHERE
QILAVCNEPE YASLPPSQIV PTLLDKGIYI ASEASFYRVL DANDQLNHRG RSQVAVNRSK
PLSYTADGPN QVWSWDITYL ASVVKGQFYY LYMFEDIYSR KIVGYEVHEQ ECGERAAELI
QRSMLREQCF KKPLVLHSDN GAPMKSLTMK AKLEELGVTA SLSRPRVSND NPYSESLFKT
LKYRPQWPKS GFSSLAAARE WVEKFVKWYN DEHKHSKLNF VSPGQRHALQ DSAILDKRKK
VLEAAKARNP KRWSKDVRNC EAVGPVMLNP DKAPADDVIN AA
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