Gene Sden_1462 details

Gene Information

• Locus tag: Sden_1462
• Symbol: hscA
• ID: 4017771
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1696162
• End bp: 1698021
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637955472
• Product: chaperone protein HscA
• Protein accession: YP_562470
• Protein GI: 91792819
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0476336
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACTGT TGCAGATTGC TGAGCCTGGC CAAAGTGCCG CTCCCCACGA ACATAGACTC 
GCCGTCGGCA TAGACCTTGG CACCACAAAT TCATTAGTCG CCGCGGTACG AAGCGGTGAA 
GCACTGACCT TAGCCGATAG TGAAGGGCGT CATTCTCTGC CATCTGTGGT GCATTACGGC 
GTTGACTCAA CCTTAGTCGG CCACGATGCC GAAGCCTTGT CGGCACTTTT CCCTGCTCAA 
ACATTAGTGT CAGTGAAGCG CTTTATGGGT AAGAGCCTCA GTGACATTCA AGCGGGCATG 
CAAGAATTTC CCTATGAATT TTCCGTTAGT GAGCAAGGGC TGCCATTATT TGTGATGCCC 
CAAGGCGCAG TTAACCCTAT TCAAGCCTCG GCTGACATAT TGCGTCCATT AATTGAACGC 
GCTGAAAAGA CCTTAGGTGG TCAATTGCAG GGTGTGGTAA TTACTGTGCC AGCCTATTTC 
GATGATGCCC AGCGCCAAGG CACTAAAGAT GCGGCCGAGT TACTGGGTGT CAAAGTACTG 
CGTTTACTTA ACGAGCCAAC GGCGGCGGCC ATTGCTTACG GACTTGATAG CAAACAAGAA 
GGCGTTATCG CTGTTTATGA TTTAGGTGGC GGCACCTTTG ATATTTCAGT GCTACGTTTA 
AGTGGCGGCG TATTCGAAGT CTTGGCCACA GGTGGCAACT CAGCCCTAGG TGGCGATGAT 
TTTGACCATT TATTACAGCA ACATCTGCAA GCGGCTTGGG GGTTAACCTC AGCGTCGGCG 
CAGTTATCCC GCCAACTGCT TATCGAAGCC CGCCGTGTTA AAGAAGCCTT GACCGATAAC 
GACACAGTCA CTGCCCATGT CAGCCTTGAT GGCTCAGACT TAAGTCTTGA GATAAGCAAA 
GCGGATTTTG AAGCCTTGAT TGCGACGTTA GTGAAGAAAA CCATCAGCAG TTGTCGCCGT 
ACTCTTCGTG ATGCTGGCAT AAGCACAGAT GAAGTCATTG AAACGGTAAT GGTCGGCGGT 
TCGACTCGAG TACCGTTAGT GCGTCAGCAA GTTGAGCAGT TTTTTAACAA GACGCCGTTA 
ACTTCCATCG ATCCCGATCG CGTGGTTGCC ATAGGGGCTG CTATTCAAGC GGATATTTTA 
GTGGGCAATA AGCCAGATTC AGATCTGCTG CTACTTGACG TTATTCCACT TTCCCTTGGC 
ATAGAAACCA TGGGCGGTTT AGTGGAGAAA GTTATTCCCC GCAATACCAC TATTCCGGTT 
GCCCGCGCTC AGGAATTTAC CACCTTTAAA GATGGTCAAA CTGCCATGGC CTTCCATGTG 
GTGCAAGGTG AGCGTGAGCT GGTGGATGAT TGCCGTTCAC TAGCGCGCTT TACCTTAACG 
GATATCCCTG CACTTGCGGC AGGGGCTGCT CACATTCGGG TGACCTTCCA AGTGGATGCC 
GATGGCTTAT TAAGCGTTAC TGCCATGGAG AAATCAACTG GGGTTAATAC CAGTATTCAG 
GTGAAGCCTT CCTTTGGTTT ATCAGATCTT GAGATTGCGA CCATGCTTAA AGATTCCATG 
AAGCATGCTA AAGATGATAT CAGCCTGCGT ATGCTTACCG AGCAGAAAGT CGAAGCCATG 
CGGGTGATTG AATCCCTGCA AGCCGCGCTC AATAATGACG GTGATTTACT TGAGCTTAGC 
GAGCGTGAAT CCCTGCAAGC GGCTTTAGCA AACCTTGGCG AAATAGCCAA AGGTAATGAT 
AGAGACGCAA TCGAGCAGGC TATTAAGGCA CTGGATGATA AGACTCAAGA TTTCGCGTCA 
CTGCGGATGG ACAACTCTAT TAAGGCGGCC CTAAAGGGTC AGTCTATCGA TAATATATAG 

 

Protein sequence

MALLQIAEPG QSAAPHEHRL AVGIDLGTTN SLVAAVRSGE ALTLADSEGR HSLPSVVHYG 
VDSTLVGHDA EALSALFPAQ TLVSVKRFMG KSLSDIQAGM QEFPYEFSVS EQGLPLFVMP 
QGAVNPIQAS ADILRPLIER AEKTLGGQLQ GVVITVPAYF DDAQRQGTKD AAELLGVKVL 
RLLNEPTAAA IAYGLDSKQE GVIAVYDLGG GTFDISVLRL SGGVFEVLAT GGNSALGGDD 
FDHLLQQHLQ AAWGLTSASA QLSRQLLIEA RRVKEALTDN DTVTAHVSLD GSDLSLEISK 
ADFEALIATL VKKTISSCRR TLRDAGISTD EVIETVMVGG STRVPLVRQQ VEQFFNKTPL 
TSIDPDRVVA IGAAIQADIL VGNKPDSDLL LLDVIPLSLG IETMGGLVEK VIPRNTTIPV 
ARAQEFTTFK DGQTAMAFHV VQGERELVDD CRSLARFTLT DIPALAAGAA HIRVTFQVDA 
DGLLSVTAME KSTGVNTSIQ VKPSFGLSDL EIATMLKDSM KHAKDDISLR MLTEQKVEAM 
RVIESLQAAL NNDGDLLELS ERESLQAALA NLGEIAKGND RDAIEQAIKA LDDKTQDFAS 
LRMDNSIKAA LKGQSIDNI