Gene Sden_1461 details

Gene Information

• Locus tag: Sden_1461
• Symbol: hscB
• ID: 4017770
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1695566
• End bp: 1696090
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637955471
• Product: co-chaperone HscB
• Protein accession: YP_562469
• Protein GI: 91792818
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.0354775
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTATT TTAACCTGTT TAATTTTACA CCTTCCTTCG ATATCGATAC TGGCTTACTT 
GCAGAACGCT ACCGCGAGCT GCAAAAGGCG GTACATCCCG ATAAGTTTGC CAACGACAGC 
GAGCAGCAAA AGCTACTCGC CGTACAGCGC ACAGCTCAAG TTAATGACGG TTACCATACC 
CTAAAACAGC CACTGCGCCG CGCTGAGCAC TTACTTAGCC TAGGTGGCGT CGATTTAAGT 
CATGAAACTA CCACGATCAA AGATACTGTG TTTTTAATGC AGCAGATGGA TTGGCGTGAA 
GCCTTGGAAG ACATTAAACA CAGTAAGCAG CCCCAAGAGC AAATTGATGA ACTCTACGAT 
TCATTCTCAG CTCATGAAAA ACTGTTGTTC TCTCAGTTAA GCCATCTATT GCAAACCCAA 
GATGAGGTCG CCTACCTAAA GGCGGCAGAT CAAGTGCGTA AGCTTAAATT TATGGCAAAA 
TTACAGCAAG AGTTAACCAA CATAGAAGAT GCCTTGCTTG ACTAA 

 

Protein sequence

MNYFNLFNFT PSFDIDTGLL AERYRELQKA VHPDKFANDS EQQKLLAVQR TAQVNDGYHT 
LKQPLRRAEH LLSLGGVDLS HETTTIKDTV FLMQQMDWRE ALEDIKHSKQ PQEQIDELYD 
SFSAHEKLLF SQLSHLLQTQ DEVAYLKAAD QVRKLKFMAK LQQELTNIED ALLD