Gene Sden_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1460 
Symbol 
ID4017769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1695195 
End bp1695518 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content43% 
IMG OID637955470 
Productiron-sulfur cluster assembly protein IscA 
Protein accessionYP_562468 
Protein GI91792817 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0413518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTA CAATGACCCC AGCGGCGGCT GACAGAGTAA AATCATTTCT CGTCAATCGC 
GGCAAAGGAT TAGGTCTTCG TCTTGGGTTA CGTACTTCTG GTTGCTCAGG CATGGCATAC
GTGATTGAGT TTGTTGACAC ACTCAATGAT GATGATGAAA TCTACACCAT AGACGATGTT
AACATCATCA TCGATGCTAA GAGTTTCATC TATCTGCAAG GGATTGAATT GGATTTCGTG
AAAGAAGGCC TCAATGAAGG TTTCCAGTTT AATAACCCGA ATGCAAAAGG TGAGTGCGGT
TGTGGTGAGA GCTTTACTGT ATAA
 
Protein sequence
MAITMTPAAA DRVKSFLVNR GKGLGLRLGL RTSGCSGMAY VIEFVDTLND DDEIYTIDDV 
NIIIDAKSFI YLQGIELDFV KEGLNEGFQF NNPNAKGECG CGESFTV