Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1457 |
Symbol | |
ID | 4017766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1692994 |
End bp | 1693455 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637955467 |
Product | iron-sulfur cluster assembly transcription factor IscR |
Protein accession | YP_562465 |
Protein GI | 91792814 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) [TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0691454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTA CATCAAAAGG TCGCTACGCA GTAACAGCCA TGTTGGATGT AGCGATTCAT TCAACAACAG GGCCGGTTCC CTTAGCCGAT ATCTCCGAAA GACAGGGAAT ATCGCTTTCT TATCTAGAAC AACTTTTTGC TAAGTTACGT AAAGAAGGTC TAGTCGCCAG TGTCCGTGGA CCAGGTGGCG GTTATCATTT AGGCCTAGAA GCAAAAGATA TCTCTATTAG CATGGTCGTG CATGCAGTAG ATGAATCTGT GGATGTGACT CGCTGTCAAG GCAAAGGAAA TTGCCAGAGT GGCACACGTT GCTTAACCCA TTCTTTATGG GGAGATCTCA GTAAGCAAAT TGCCGATTTT TTGGATGGTA TTTCGCTTGC TGGCTTGATG CAAAAGCGAG ATGTGCAATT TATTTCGTTA AAGCAAGACA AAATTCAGAA CGAGCATAGA TTGAGTCTTT AA
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Protein sequence | MKLTSKGRYA VTAMLDVAIH STTGPVPLAD ISERQGISLS YLEQLFAKLR KEGLVASVRG PGGGYHLGLE AKDISISMVV HAVDESVDVT RCQGKGNCQS GTRCLTHSLW GDLSKQIADF LDGISLAGLM QKRDVQFISL KQDKIQNEHR LSL
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