Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1447 |
Symbol | ribA |
ID | 4017756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1686025 |
End bp | 1686642 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637955457 |
Product | GTP cyclohydrolase II |
Protein accession | YP_562455 |
Protein GI | 91792804 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000211682 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATAA ACTATATCGC TACTTCTAAA TTACCTACGC CTTGGGGCGT GTTTTCCATG CACGGTTTTG AAGATACTCA AACGGGTAAA GAGCATGTTG CACTGACCTT TGGTGAGTGG CAGCCAAGCC ACGCTATCTT AGGTCGTATT CATTCTGAAT GTTTAACCGG TGATGCCTTA TTTAGCTTAC GCTGCGACTG TGGTTTTCAA TTACAGACGG CGATGCAGAA CATTGCCGAA GCGGGGCAAG GATTTATTCT TTACTTACGC CAAGAAGGCC GCGGTATTGG CTTACTCAAT AAAATTCGCG CCTATGAGTT GCAAGATGCG GGGGCGAACA CGGTTGAAGC CAATGAACGT TTAGGTTTTG ATGCCGATAT GCGTAAGTAC GACATGATAG CGCCAATGCT TGAAAAAATT GCCGTGACTC AAGTTAAGCT AATGACGAAT AACCCCCGTA AAGTCAAAGC GATGCAAGAC TTAGGTATTG TCGTTGCTGA AAGGGTGCCT TTGCAGGTGG GTAAAAACCG CTACAATGAA GCTTACCTAA AGACCAAATC CACTGAGCTT GGACATATGA TGTCTGAACA TCACTTTAAT GATGATAAAG GCAACTAA
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Protein sequence | MSINYIATSK LPTPWGVFSM HGFEDTQTGK EHVALTFGEW QPSHAILGRI HSECLTGDAL FSLRCDCGFQ LQTAMQNIAE AGQGFILYLR QEGRGIGLLN KIRAYELQDA GANTVEANER LGFDADMRKY DMIAPMLEKI AVTQVKLMTN NPRKVKAMQD LGIVVAERVP LQVGKNRYNE AYLKTKSTEL GHMMSEHHFN DDKGN
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