Gene Sden_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1447 
SymbolribA 
ID4017756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1686025 
End bp1686642 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content44% 
IMG OID637955457 
ProductGTP cyclohydrolase II 
Protein accessionYP_562455 
Protein GI91792804 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000211682 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATAA ACTATATCGC TACTTCTAAA TTACCTACGC CTTGGGGCGT GTTTTCCATG 
CACGGTTTTG AAGATACTCA AACGGGTAAA GAGCATGTTG CACTGACCTT TGGTGAGTGG
CAGCCAAGCC ACGCTATCTT AGGTCGTATT CATTCTGAAT GTTTAACCGG TGATGCCTTA
TTTAGCTTAC GCTGCGACTG TGGTTTTCAA TTACAGACGG CGATGCAGAA CATTGCCGAA
GCGGGGCAAG GATTTATTCT TTACTTACGC CAAGAAGGCC GCGGTATTGG CTTACTCAAT
AAAATTCGCG CCTATGAGTT GCAAGATGCG GGGGCGAACA CGGTTGAAGC CAATGAACGT
TTAGGTTTTG ATGCCGATAT GCGTAAGTAC GACATGATAG CGCCAATGCT TGAAAAAATT
GCCGTGACTC AAGTTAAGCT AATGACGAAT AACCCCCGTA AAGTCAAAGC GATGCAAGAC
TTAGGTATTG TCGTTGCTGA AAGGGTGCCT TTGCAGGTGG GTAAAAACCG CTACAATGAA
GCTTACCTAA AGACCAAATC CACTGAGCTT GGACATATGA TGTCTGAACA TCACTTTAAT
GATGATAAAG GCAACTAA
 
Protein sequence
MSINYIATSK LPTPWGVFSM HGFEDTQTGK EHVALTFGEW QPSHAILGRI HSECLTGDAL 
FSLRCDCGFQ LQTAMQNIAE AGQGFILYLR QEGRGIGLLN KIRAYELQDA GANTVEANER
LGFDADMRKY DMIAPMLEKI AVTQVKLMTN NPRKVKAMQD LGIVVAERVP LQVGKNRYNE
AYLKTKSTEL GHMMSEHHFN DDKGN