Gene Sden_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1428 
Symbol 
ID4017453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1663086 
End bp1664999 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content46% 
IMG OID637955436 
Productheat shock protein 90 
Protein accessionYP_562437 
Protein GI91792786 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000680402 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAGC AAGAAACTCA TGGCTTTCAA ACTGAAGTAA AACAACTTCT GCAATTGATG 
ATCCACTCTC TGTATTCGAA CAAAGAAATT TTCTTACGGG AGTTGGTCTC TAATGCGGCC
GATGCGGCTG ATAAATTGCG TTATCTAGCC CTAACTGACG ATGCCTTATA TGAAGGTGAC
GGCGAGTTAC GTGTGCGCGT AAGCACAGAT AAAGAAAAGG GCACTGTGAC CATTTCTGAT
AATGGCATAG GCATGACCCG TGACAGCGTA ATTGAGCATT TAGGCACTAT TGCCAAATCG
GGCACAAAAG AATTCTTTAA CAATCTATCC GGTGAAGCTA ACAAAGATTC GCAGCTTATT
GGTCAATTTG GTGTGGGTTT CTACTCTGCC TTTATCGTGG CTAAAAAAGT CACAGTGCGT
ACTCGCGCTG CTGGCCATCC CGCCAATGAA GGCGTGCTGT GGGAGTCAGA AGGTGAAGGT
TCATTCAATG TAGAAACCAT CACTAAGAAC TCTCGCGGTA CTGAAATTGT ATTGCACCTT
CGCGATGAAG AGAAAGAGTT TGCCGATGAT TGGCGCCTGC GCTCTATCAT CACTAAGTAC
TCAGATCATA TCTCAGTACC TGTCGAAATG TTTGAAGCGG GCAAAGACGC ACAAGAAGGC
GAAGATGGCG AAACCATTGC TGCGGTTGAA GGCCAATGGA AGCCGATGAA CAAGGCCACT
GCCTTGTGGA CGCGTAACAA GTCAGACATT AGCGATGAAG AATACCAAGA GTTTTATAAG
CATATCTCTC ACGATTATAC CGATGCATTA AAGTGGTCGC ATAATCGAGT TGAAGGCAAG
CAAGAATACA CCAGTCTGTT GTATATCCCA GCCAAAGCCC CATGGGACAT GTGGAATCGC
GATCACAAAC ACGGCTTAAA ACTGTTTGTA CAGCGCGTCT TCATCATGGA TGAAGCCGAG
CAGTTTTTGC CAAACTACTT GCGTTTCGTG CGTGGATTGC TGGATTCAAA CGATTTACCG
TTAAACGTAT CTCGTGAAAT ATTACAAGAT AATCAAGTCA CTACCGCAAT GCGTGTCGGC
GTAACTAAGC GCGTATTGGG CATGCTTGAA AAGTTAGCCA AAGATGAGCC TGGGCAGTAT
CAATCATTCT GGGCTGAGTT TGGCCAAGTG TTAAAAGAAG GCCCTGCGGA AGATTTTGCT
AACAAAGAAC GCATTGCTGG TTTATTACGT TTTGCTTCGA CCCATGAAGG CTCTGCGGCG
ACCACAGTGT CGTTAGAAGA TTACATCAGC CGCATGAAAG AAGGCCAAGA CAAGATTTAC
TATATCGTTG CCGACAGCCA CGAAGCGGCG GCCAATAGCC CGCACCTTGA GCTACTGCGC
AAGAAAGGCA TCGAAGTATT ATTGATGTCT GAGCGCATCG ATGAATGGTT AATCAATCAT
TTAACTGAGT TCAAGGGCAA GAAACTGCAT TCAGTCACTC GCGGTGACCT AGAACTGGGT
GAACTTGAAG ATGCAGCCGA TAAAGAAGCT AAAGATAAAA TCACCGAAGA GGCTAAAGGC
TTAGTTGAGC GCATGAAAGC GGCCCTTGGC GCTAAAGTGT CAGAGGTTAA AGTGACGACT
CGCTTAACCG ATACCCCAGC CTGTGTGGTC GCCGGTGAAG GTGAAATGTC GACGCAAATG
ATTAAATTGA TGCAAGCTGC GGGTCAGGCT GTGCCTGAAT CTAAGCCAAC ATTTGAAATT
AATCCAAACC ATCCTTTAGT GGCACGCTTA AATGATGAAG CCGACGAGCA GTTATTTGCC
GATTGGGCCA GTTTGTTACT GCAACAGGCG CAGTTGTCTG AAAAGGGCAG CCTCGCCGAC
CCATCGGCCT TCATCAAGTT GATGAATCAG ATGTTATTGG CTAACGCTAA ATAA
 
Protein sequence
MSQQETHGFQ TEVKQLLQLM IHSLYSNKEI FLRELVSNAA DAADKLRYLA LTDDALYEGD 
GELRVRVSTD KEKGTVTISD NGIGMTRDSV IEHLGTIAKS GTKEFFNNLS GEANKDSQLI
GQFGVGFYSA FIVAKKVTVR TRAAGHPANE GVLWESEGEG SFNVETITKN SRGTEIVLHL
RDEEKEFADD WRLRSIITKY SDHISVPVEM FEAGKDAQEG EDGETIAAVE GQWKPMNKAT
ALWTRNKSDI SDEEYQEFYK HISHDYTDAL KWSHNRVEGK QEYTSLLYIP AKAPWDMWNR
DHKHGLKLFV QRVFIMDEAE QFLPNYLRFV RGLLDSNDLP LNVSREILQD NQVTTAMRVG
VTKRVLGMLE KLAKDEPGQY QSFWAEFGQV LKEGPAEDFA NKERIAGLLR FASTHEGSAA
TTVSLEDYIS RMKEGQDKIY YIVADSHEAA ANSPHLELLR KKGIEVLLMS ERIDEWLINH
LTEFKGKKLH SVTRGDLELG ELEDAADKEA KDKITEEAKG LVERMKAALG AKVSEVKVTT
RLTDTPACVV AGEGEMSTQM IKLMQAAGQA VPESKPTFEI NPNHPLVARL NDEADEQLFA
DWASLLLQQA QLSEKGSLAD PSAFIKLMNQ MLLANAK