| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1401 |
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| Symbol | tgt |
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| ID | 4017338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1633803 |
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| End bp | 1634936 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955409 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_562410 |
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| Protein GI | 91792759 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000397481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTG AATTAGATAC AACCCAAGGC CGTGCCCGTC GTGGTCGCCT GATTTTTGAC
CGTGGCACAG TTGAAACCCC GGCATTTATG CCAGTGGGCA CTTACGGCAC AGTGAAAGGC
ATGACCCCAG AAGAAGTACG CGCCACAGGT GCAGACATTT TATTGGGCAA CACTTTCCAT
TTATGGCTGC GCCCAGGCGA AGAAATCATG CGTAAGCACG GTGACTTGCA CGACTTTATG
AACTGGCAGC GCCCCATATT GACAGACTCT GGCGGTTTTC AAGTGTTTAG CCTTGGGGAC
ATACGTAAGA TCACCGAAGA AGGCGTGCAC TTTCGCTCAC CTATCAATGG TGAGAAGATT
TTCCTAGACC CAGAAAAGTC AATGCAAATT CAGGATTCAC TTGGCTCAGA TGTGGTGATG
ATTTTTGATG AATGCACCCC ATACCCAGCC ACAGAAGATG AAGCACGTAA GTCAATGCAA
ATGTCATTGC GTTGGGCGCA ACGTTCTCGT GATGAGTTTG ACCGTTTAGA AAATCCAAAT
GCATTGTTTG GCATTATTCA AGGCGGCGTT TATGAAGACT TACGTGACGA AAGTCTAACT
GGCTTAGTTA ACATTGGCTT TGACGGTTAT GCTATCGGCG GCTTAGCCGT AGGCGAGCCT
AAGCCTGACA TGCACCGTAT TCTTGAACAT GTGTGTCCGC AAATTCCAGC AGATAAGCCA
CGTTATTTAA TGGGCGTGGG TAAACCTGAA GATTTGGTGG AAGGTGTGCG CCGCGGCGTC
GATATGTTTG ACTGCGTGAT GCCTACCCGT AATGCCCGCA ATGGTCATCT GTTTACCAGC
GAAGGGGTGA TTAAAATCCG TAATGCTCGC CACAGGGATG ACACGGCGCC ATTGGATGAA
AAGTGTGATT GTTACACCTG TAAGAACTAC TCACGGGCGT ACTTGTATCA CTTAGATCGT
TGTAATGAAA TTTTAGGTGC GCGTTTAAAC ACCATCCACA ATCTACGTTA TTACCAAATG
TTGATGGAAG GTTTGCGCGG CGCTATTGAG ACGGGTACAT TAGACGCCTT TGTAAGTGAC
TTCTATACCG GCTTAGGGCG CGAAGTACCT GAAGTACCAG AGTTAGTTGA TTAA
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| Protein sequence | MKFELDTTQG RARRGRLIFD RGTVETPAFM PVGTYGTVKG MTPEEVRATG ADILLGNTFH
LWLRPGEEIM RKHGDLHDFM NWQRPILTDS GGFQVFSLGD IRKITEEGVH FRSPINGEKI
FLDPEKSMQI QDSLGSDVVM IFDECTPYPA TEDEARKSMQ MSLRWAQRSR DEFDRLENPN
ALFGIIQGGV YEDLRDESLT GLVNIGFDGY AIGGLAVGEP KPDMHRILEH VCPQIPADKP
RYLMGVGKPE DLVEGVRRGV DMFDCVMPTR NARNGHLFTS EGVIKIRNAR HRDDTAPLDE
KCDCYTCKNY SRAYLYHLDR CNEILGARLN TIHNLRYYQM LMEGLRGAIE TGTLDAFVSD
FYTGLGREVP EVPELVD
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