| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1400 |
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| Symbol | queA |
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| ID | 4017337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1632610 |
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| End bp | 1633650 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955408 |
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| Product | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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| Protein accession | YP_562409 |
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| Protein GI | 91792758 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
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| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00147382 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCGTTG CCGATTTTTC TTTTGACCTA CCCGATGAGT TAATTGCTCG CTATCCTACT
GCGCAGCGCA ATGCGTCGCG CTTGTTGACC TTAGATGGTC CCACAGGCGC ATTAGCGGAT
AAACAATTCA CCGACTTGTT TGAAATGATA AATCCTGGTG ATTTAATGGT ATTTAATAAT
ACTAGAGTGA TCCCTGCGCG TTTGTTTGGT CAAAAAGCCA CCGGGGGTAA GCTTGAAATC
TTGGTTGAGC GTATGTTGGA TGATAAGCGC ATATTGGCCC ATGTTCGCAG TTCAAAATCC
CCTAAGGTCG ATACCCTTAT CAATCTTGAT GGTGAACATC AGATGAAGAT GATAGCCCGC
CACGATGCGC TATTTGAGCT TGAGCTATTA TCTGAACTCA CCATTTTAGA AGTATTAGAG
CAAGTGGGCC ACATGCCTTT GCCGCCTTAT ATTGACCGTC CTGATGAGGA TGCCGATAAA
GAGCGTTATC AAACTGTGTA TAACAAGACG CCTGGCGCAG TTGCAGCGCC AACGGCGGGC
TTGCACTTCG ATGATGCCAT GTTAAGTGCG CTCAAACACA AAGGCGTGAA CATTGCTTTT
GTGACCTTGC ATGTGGGGGC TGGAACTTTT CAACCTGTAC GTGTTGATAA TGTCCTTGAG
CATAAGATGC ATTCAGAGTG GGCCGATGTC CCCCAAGACG TGGTTGACCT TATTGCGCAA
ACCAAAGCTG CGGGTAATCG CGTTATTGCT GTGGGCACCA CCTCAGTACG CTCCCTTGAA
AGCGCGGCCA AGGCCTGTGG TGATAAACCA CTCGCTACCT TTAGCGGCGA TACCGACATC
TTTATTTACC CAGGCTATGA GTTCAAAGTG GTGGATGCCA TGGTGACTAA TTTCCATTTG
CCTGAGTCGA CACTCATCAT GTTAATCAGT GCATTTACTG GGGTTGATGA GGTTCGATAC
GCTTATCAAC ACGCAATTGC GCAAAAATAC CGCTTTTTTA GCTATGGCGA TGCGATGTTT
TTAACGAAAA AAGCCCAGTA A
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| Protein sequence | MRVADFSFDL PDELIARYPT AQRNASRLLT LDGPTGALAD KQFTDLFEMI NPGDLMVFNN
TRVIPARLFG QKATGGKLEI LVERMLDDKR ILAHVRSSKS PKVDTLINLD GEHQMKMIAR
HDALFELELL SELTILEVLE QVGHMPLPPY IDRPDEDADK ERYQTVYNKT PGAVAAPTAG
LHFDDAMLSA LKHKGVNIAF VTLHVGAGTF QPVRVDNVLE HKMHSEWADV PQDVVDLIAQ
TKAAGNRVIA VGTTSVRSLE SAAKACGDKP LATFSGDTDI FIYPGYEFKV VDAMVTNFHL
PESTLIMLIS AFTGVDEVRY AYQHAIAQKY RFFSYGDAMF LTKKAQ
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