Gene Sden_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1399 
Symbol 
ID4017336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp1631687 
End bp1632289 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content43% 
IMG OID637955407 
Producthypothetical protein 
Protein accessionYP_562408 
Protein GI91792757 
COG category[S] Function unknown 
COG ID[COG3124] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0629048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATC TTGCACACTT ACATCTTGCC GATATCAGCG GAACACACTT GGCAGCGAAT 
TTAGCCGGCG ACTTTGCTAA AGGCAACATA GAGCATCACC CTCAACATTT ACAGCAAGGG 
ATCTGGCTGC ATCGTCAAAT CGATATAGTG ACAGACAGTA ACGAAATCGT CACAGACTTA 
CTCAAGATGT TTCCTCAATC TTTGAGACGT GTTGCGCCCA TCTTAATGGA TTTAAGCTTC 
GACCATTTTT TAGCTTACTA CTGGGATGAG TATCACCATC AAAGCCTAAG TGACTTTAGT 
CAAAAAGCAT ACCAAAGCTT GGCAACGACG GAGCAATTGC CTGAGAAACT TAATCTTATC 
GCCCCTAAGA TTATTGAGCA GGACTGGTTA GGCAGTTATC AAACCAAAGC AGGGTTGTTT 
CAAGCGGTAA AGGGTGTCAG TCAACGTTTA TCTAAGCCTG AGCTATTTAA CGGTGCACAG 
GAACACATAG ATAAGTTGTA TATCGAAATA GAAATTGCCT TTCGCACCTT CTACCCTCAG 
TTGATGGCTT ACAGCCGCAT CTATAGTCGC AAAACCCCAG AACAATATTT ACCTATACCT 
TAA
 
Protein sequence
MNYLAHLHLA DISGTHLAAN LAGDFAKGNI EHHPQHLQQG IWLHRQIDIV TDSNEIVTDL 
LKMFPQSLRR VAPILMDLSF DHFLAYYWDE YHHQSLSDFS QKAYQSLATT EQLPEKLNLI 
APKIIEQDWL GSYQTKAGLF QAVKGVSQRL SKPELFNGAQ EHIDKLYIEI EIAFRTFYPQ 
LMAYSRIYSR KTPEQYLPIP