Gene Sden_1390 details

Gene Information

• Locus tag: Sden_1390
• ID: 4017353
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1622167
• End bp: 1622565
• Gene Length: 399 bp
• Protein Length: 132 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637955392
• Product: 4-hydroxybenzoyl-CoA thioesterase
• Protein accession: YP_562399
• Protein GI: 91792748
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family; [TIGR02799] tol-pal system-associated acyl-CoA thioesterase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00302966
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAAT GGCCAATTTC TGTTTATTAC GAAGACACTG ATGCTGGTGG TGTGGTGTAT 
CACTCAAATT ATTTAAATTT TTTTGAGCGG GCTCGCACTG AGTGGCTAAA AGCCATGGGA 
ATAAGTCAAA CTGCGTTATT GAAACAGGAT ATTGCCTTTG TGGTGAAACG CGCCGAAGTT 
GATTTTCGCC GCGCGGCAAA ATTTGAACAG AACTTCATGG TTGAGTCTAC GGTCATAGAA 
CTTAAAAAGG CGTCTTTGGT GTTTCATCAA AGTTTGCTAG ATGATCAAGG CAACTGCTAT 
TGTGAGGGCA AGATTAAAGT CGCTTGTGTT TCACTATTGC AGATGCGCCC CATTGCTATT 
CCAGAAAATA TAGTCCAGGA GTTTAACCGT GCACGCTGA 

 

Protein sequence

MFKWPISVYY EDTDAGGVVY HSNYLNFFER ARTEWLKAMG ISQTALLKQD IAFVVKRAEV 
DFRRAAKFEQ NFMVESTVIE LKKASLVFHQ SLLDDQGNCY CEGKIKVACV SLLQMRPIAI 
PENIVQEFNR AR