| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1384 |
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| Symbol | |
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| ID | 4017752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1613441 |
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| End bp | 1615603 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955386 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | YP_562393 |
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| Protein GI | 91792742 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAGA ATAAGTGTCC AGTGATGCAC GGTAGTGCTA CTACAACCGA AAATAGTATG
GCCAACATGA ACTGGTGGCC TAAGTCATTA AGCCTAGATA TTTTGCATCA GCACGATCAT
AAGACCAACC CAATGGCTGC GGACTTTAAC TATCAAGATG AAGTTAAAAA ACTCGATTTT
GTCGCCCTTA AAAATGACTT ACATGCACTG ATGACAGACA GTCAAGCATG GTGGCCCGCT
GATTGGGGGC ATTATGGCGG CCTTATGATA AGGCTGACCT GGCATGCTGC TGGTACTTAC
AGAATCGCAG ATGGTCGTGG CGGAGCAGGC CATGGTAGTC AACGTTTTGC GCCACTCAAC
TCTTGGCCAG ATAACGGCAA CTTAGATAAA GCACGTCGGT TACTTTGGCC AATCAAGAAA
AAGTACGGTA ATAAGCTTAG CTGGGCCGAT TTAATCGCCT ATGCGGGGAC AATTGCCTAT
GAGTCCATGG GCCTAAAAAC CTTTGGCTTT GCTTTCGGGC GGGAAGATAT TTGGCATCCC
GAAAAGGACA TTTACTGGGG GGCTGAAAAA GACTGGTTGC TCCCCACAGA CAATGACAAC
AGCCGCTACT CTGGAGAGAG AAACCTGGAA AATCCTCTAG CAGCGGTAAT GATGGGGCTT
ATTTATGTCA ACCCTGAAGG CGTGGATGGC AAACCAGATC CATTAAAGAC GGCTCAAGAT
ATACGTGAGA CCTTTGCGCG TATGGCCATG AATGATGAAG AGACAGTGGC CTTAACTGCC
GGCGGACATA CAGTTGGTAA AGCTCATGGC AATGGCAATG CCGATTTATT GGGCCCTGAA
CCCGAAGATG CTGATATTCA TGACCAAGGC TTTGGTTGGT TAAATAAAGC GAAACGTGGC
ATAGGTCGTG ACACAGTCAC TAGTGGTATC GAAGGTGCTT GGACCACACA TCCAACCCAG
TGGGACAACG GTTACTTTAC CATGTTACTT AACCACGAGT GGGAGCTTTG TAAGAGCCCC
GCAGGCGCTT GGCAGTGGCA ACCGATTAAT ATCAAAGAAG AAGATAAACC TCGCGATGTT
GAAGACCCTT CCATCAGTAC AATGCCCATG ATGACAGATG CGGACATGGC CATGAAGATG
GACCCTGAGT ATCGCAAGAT ATCTGAGCAC TTTCATCGAG ATCCTGAGTA TTTTTCAAAA
GTTTTCTCCC GCGCTTGGTT CAAACTGACC CACAGGGATA TGGGGCCAAA GGTGCGTTAC
TTAGGCCCAG ATGTACCAGT AGAAGATTTA CTTTGGCAAG ATCCGGTTCC TACAGGACCT
AAAGACTTTA ATGTTGCGGT GGTGAAAAAA GCAATAAAGG AAACGGGTTT GAGTATCAGT
GACATGGTGA CAACGGCCTG GGACAGTGCC AGAACCTTTA GGGGGTCTGA TAAACGCGGC
GGTGCCAATG GGGCTCGCAT TCGTTTGGCT TTGCAAAAAC AGTGGGCTGG AAATGAACCT
AAGCGCCTTG CTAGCGTCCT TTCTGTGCTT GAACCTATTG CCGCAAGTCA TGGCGTCAGT
GTTGCCGATG TCATTGTGTT AGCAGGTAAC CTTGGTATTG AGCTTGCGGC TAAAAAGGCA
GGTTTTGACG TGACAGTGCC TTTTATATCG GGCCGTGGTG ATGCCACTGA TGAGATGACA
GATAATGAAT CATTTGCTGT GTTAGAGCCG CTTCATGATG GTTATCGTAA TTGGTTAAAG
CAAGATTTTG CAGTTAGCGC AGAAGAGCTG ATGTTAGATC GTACTCAACT CATGGGGCTT
ACGGCTCATG AAATGACAGT CCTCGTGGGC GGTATGCGAG TTATTGGTAC TAATTATGCT
GAGACTGGTC ATGGTGTGTT CACTGAACGC AAGGGGGCGC TTACCAATGA CTTCTTTGTC
AATCTAACCG ACATGAATTA CATCTGGAAG CCCATTGGTC AAAACGAGTA TGAAATTTGT
GAGCGTGAAA CGGGTAAACG TAAGTGGACA GCGTCTCGGG TGGATCTGAT TTTTGGTTCT
AATTCAGTGC TTAGATCCTA TGCCGAAGTG TATGCGCAAG ATGATAACAA GCAAAAATTC
GTTAATGATT TTATTTCGGC CTGGACTAAA ATGATGAATG CCGATCGTTT TGATGTGAGT
TAA
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| Protein sequence | MSENKCPVMH GSATTTENSM ANMNWWPKSL SLDILHQHDH KTNPMAADFN YQDEVKKLDF
VALKNDLHAL MTDSQAWWPA DWGHYGGLMI RLTWHAAGTY RIADGRGGAG HGSQRFAPLN
SWPDNGNLDK ARRLLWPIKK KYGNKLSWAD LIAYAGTIAY ESMGLKTFGF AFGREDIWHP
EKDIYWGAEK DWLLPTDNDN SRYSGERNLE NPLAAVMMGL IYVNPEGVDG KPDPLKTAQD
IRETFARMAM NDEETVALTA GGHTVGKAHG NGNADLLGPE PEDADIHDQG FGWLNKAKRG
IGRDTVTSGI EGAWTTHPTQ WDNGYFTMLL NHEWELCKSP AGAWQWQPIN IKEEDKPRDV
EDPSISTMPM MTDADMAMKM DPEYRKISEH FHRDPEYFSK VFSRAWFKLT HRDMGPKVRY
LGPDVPVEDL LWQDPVPTGP KDFNVAVVKK AIKETGLSIS DMVTTAWDSA RTFRGSDKRG
GANGARIRLA LQKQWAGNEP KRLASVLSVL EPIAASHGVS VADVIVLAGN LGIELAAKKA
GFDVTVPFIS GRGDATDEMT DNESFAVLEP LHDGYRNWLK QDFAVSAEEL MLDRTQLMGL
TAHEMTVLVG GMRVIGTNYA ETGHGVFTER KGALTNDFFV NLTDMNYIWK PIGQNEYEIC
ERETGKRKWT ASRVDLIFGS NSVLRSYAEV YAQDDNKQKF VNDFISAWTK MMNADRFDVS
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