Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1383 |
Symbol | |
ID | 4017746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1606037 |
End bp | 1606594 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637955380 |
Product | D,D-heptose 1,7-bisphosphate phosphatase |
Protein accession | YP_562392 |
Protein GI | 91792741 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
TIGRFAM ID | [TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase [TIGR01656] histidinol-phosphate phosphatase family domain [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000311107 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGTGA AGAAAGCCGT ATTTTTAGAC CGTGATGGGG TTATCAATAA AGACACTGGG TACGTTCACC TTGTTGATGA TTTTGTATAT ATAGAAGGCG TATTTGATGC TTGTCTTGCA CTAAAGAAGA TGGGCTATCT ATTGGTCGTG GTGACTAATC AGTCCGGTAT CGCCCGCGGC ATGTACAGTG AAGATGAATT TCATTCATTA ACTGAGTGGA TGGACTGGAA CTTTGCCGAC AAAGGCGTTG AGCTTGATGG GATCTATTAC TGTCCCCATC ATAATGAGAA AGGCATAGGC GAATATAAGC ACGATTGTGA TTGCAGAAAA CCTAAGCCAG GTATGCTGAT AGATGCCGCG CAGTTTTTAA ATATCGATTT AAGCCAGTCT GTGATGGTGG GTGACAAGGC CGATGATATG CGCGCCGCCA TTGCTGCGGG TGTTGGTACA TCAATTCTGG TACGCAGCGG TAAAACGGTC GATGATGCTG GAATCGAACT TGCGACTAGA GTAGTAGACA GCATTGCCCA TGTGCCAGAC TACTTAGCCA GTCGCTAG
|
Protein sequence | MKVKKAVFLD RDGVINKDTG YVHLVDDFVY IEGVFDACLA LKKMGYLLVV VTNQSGIARG MYSEDEFHSL TEWMDWNFAD KGVELDGIYY CPHHNEKGIG EYKHDCDCRK PKPGMLIDAA QFLNIDLSQS VMVGDKADDM RAAIAAGVGT SILVRSGKTV DDAGIELATR VVDSIAHVPD YLASR
|
| |