Gene Sden_1381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1381 
Symbol 
ID4017744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp1604034 
End bp1605119 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content47% 
IMG OID637955378 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_562390 
Protein GI91792739 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0441761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTACG CTCATATTAC AGGTTGGGGA AAATGCGTTC CTCCTGCTAA GTTAACCAAT 
GATGATCTTG CCACTTTTAT GGAAACCTCC GATGAGTGGA TCAAGTCCCG CACTGGGATC 
AGTGAGCGTC ACATCAGTCA TGTTAACACC TCTGAGATGG CTAGCGTCGC CGCCGCCCAT 
GCCTTAGCTG CTGCTGGCAT CGATGGCTGT GAGCTGGATT TAATCATATT GGCATCTGCA 
AGCCCTGATA CCTTAATCCC AAATATTGCA TCCACAGTAC AAGCCAATGT AGGTGCGACC 
TGCGGTGCAT TTGATATTAA TGCTGCCTGC AGTGGTTTTC TCTATGGTTT AGGATTAGCG 
AGCTCGTTAA TTAAAAGTGG TCAAAATAAG AAAATCCTCG TGATTGGCGC CGAACGTCTG 
TCTTTCTATC TTGATTGGTC TCGCCGTGAT ACTGCAGTGC TCTTTGGCGA CGCTGCGGGT 
GCTGTGGTGC TTGAAGCCAG CGAGCAGCCA GGCGGAGTAT TAGGCTATGA GCTTAATAAC 
GATCCCGAAG GCCGCGACAT TTTAAAGTCA CAGTTTGGCA GCCAGATGGA CAGATTCGAT 
GCCAGCTCAT TGGATTTTTT CATTCAATTT AATGGCCAAG AAATCTTTAA GCGCGCCATT 
AATGGCATGG GCAGTTTAAG TGCCAAGGTG CTCGACAAGT GCCAGCTAGA TAAAGATGAT 
GTGGATTTTG TCATTCCCCA TCAGGCTAAC GAGCGTATTA TCGATACCTT AGTCAGCCGG 
ATGAAAATTC CTAAAGAAAA AGCCTTCGTT AATATTGCTA ACTATGGCAA TACTTCGGCA 
GCGACCATCC CTATCGCCAT TTGTGATGCG TTAGAGCAAG GTCTGATCAA ACCGCAACAG 
AAGATTTTGT CTTGTGCCTT TGGTGCCGGC TTAACTTCAG CGGCCGCGGT ATTTCAATGG 
GGTGATAGAG TGACTCCAGT AAGAAGAAGC GATGCAGCAC TGCCTAAATG CGATAAAACA 
GCGCTTGAAT TAATCAAACC TGCGGTGGAT TACTTTTTCA AAAAAGCCGA GCAAGAAGGC 
AGATAA
 
Protein sequence
MQYAHITGWG KCVPPAKLTN DDLATFMETS DEWIKSRTGI SERHISHVNT SEMASVAAAH 
ALAAAGIDGC ELDLIILASA SPDTLIPNIA STVQANVGAT CGAFDINAAC SGFLYGLGLA 
SSLIKSGQNK KILVIGAERL SFYLDWSRRD TAVLFGDAAG AVVLEASEQP GGVLGYELNN 
DPEGRDILKS QFGSQMDRFD ASSLDFFIQF NGQEIFKRAI NGMGSLSAKV LDKCQLDKDD 
VDFVIPHQAN ERIIDTLVSR MKIPKEKAFV NIANYGNTSA ATIPIAICDA LEQGLIKPQQ 
KILSCAFGAG LTSAAAVFQW GDRVTPVRRS DAALPKCDKT ALELIKPAVD YFFKKAEQEG 
R