| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1375 |
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| Symbol | |
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| ID | 4017622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1598279 |
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| End bp | 1598980 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955372 |
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| Product | aspartate racemase |
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| Protein accession | YP_562384 |
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| Protein GI | 91792733 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1794] Aspartate racemase |
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| TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGACCA TAGGATTATT GGGCGGCATG AGCTGGGAGT CGACCCTAAG CTATTACAAA
TTAATCAACC AAGGAGTTAA TCGTGAGTTA GGCGGACTGC ATTCGGCCAA AATATGCCTC
AATAGCGTCG ACTTTGCCGA AATCGAGCAA CTGCAACATC TGGGAGAATG GCAACAAACC
GCAGACATTC TTGCCGCAGC GGCTCAGTCT ATTGAGGCCG CTGGCGCCGA TTGCCTGCTC
ATTTGCACTA ATACCATGCA CAAGGTAGCC CCGCAAATTA GTGCAGCGAT TAACATTCCC
CTTATTCACA TTGCCGATGC CACGGCGCAG CAGCTCATCC TTGACGGTGT TAGGCGGGTC
GGGTTGCTGG GCACTCAATT CACTATGGCT GAAGACTTCT ATAAAGGCAG GCTTAGGGAT
AAGTTCGATA TAGAAGTCAT TATTCCTGAT GAAGAAGAGC AGCAGTTAGT ACACCAAGTG
ATTTACACTG AGCTGTGTCA GGGCGTCATT CGCTCTGAGT CTAGACAGCA ATATGTGGCG
ATCATCGAAA AACTGCAGCA ACAAGGCGCT CAAGCTGTGA TCCTCGGTTG CACCGAAATC
GCCTTGCTGG TGCAGCAACA GCACACTTGT GTCCCCTTGT ACGATACCAC CGCCATCCAC
GGTCAAAGTG CGGTGCAGTT TGCACTCGAA CAGCAAGGCT AA
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| Protein sequence | MKTIGLLGGM SWESTLSYYK LINQGVNREL GGLHSAKICL NSVDFAEIEQ LQHLGEWQQT
ADILAAAAQS IEAAGADCLL ICTNTMHKVA PQISAAINIP LIHIADATAQ QLILDGVRRV
GLLGTQFTMA EDFYKGRLRD KFDIEVIIPD EEEQQLVHQV IYTELCQGVI RSESRQQYVA
IIEKLQQQGA QAVILGCTEI ALLVQQQHTC VPLYDTTAIH GQSAVQFALE QQG
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