| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1366 |
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| Symbol | |
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| ID | 4017613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1588374 |
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| End bp | 1589783 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955363 |
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| Product | sigma-54 factor, interaction region |
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| Protein accession | YP_562375 |
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| Protein GI | 91792724 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA TTAACCAGCC GACAGCGCAT CAAGCGGGGA TCCCGACCAG CACTGCCATG
AGCATACTGG TGGTGGAAGA TGATGAAACT CAGCGAGAGC TTATCGTGCA GATTTTATCC
CAGTCACATT ATCAAATTGA CAGTGCCGAC AGGGTAGAAA GCGCGATTTT GAAGATAAAA
GCCAACCCAC CGGATCTTGT CTTTAGTGAT TGGAAACTAG GTCAGTTAAC CGGCATGGAT
TTACTCAATT ATGTTCGCCG TGAGCACCCA GACATGGGGT TTATTATCGC CACCGCCTAC
GGCACTATCA CACATGCCGT GGATGCCATG CAGGCTGGCG CCGATGATTA CCTGACTAAA
CCCTATCAGA GGCAGTCATT ACTCTTATCC ATAGGTAAAG TGTTTAAGGC GTTAACCCTA
AAACGCCATA ACCGCAGCCT AAGCTCTCAG CTGTCAGAGC AGCAAGCCTT AGTGGGCTTA
GTGGGCAAGG CGGCTTGCAT GCAAAAAGTG TACGACAGGT TGCTGCGAGT CGGCGCCACA
GATGCAACCG TGCTGATTGG CGGTGAGAGC GGCACAGGTA AAGAGCTTGC CGCTCGAGCA
TTGCATCAGC TGTCTAGGCG ACAACATAAA CCCTTTGTGG CGATTAATTG CGGCGCTATC
CCAGATGCCT TAGCGGAAGC TGAGCTTTTT GGCGCCGAAA AAGGCGCCTT TACCGGCGCC
ACCGAGCGTA AAATAGGTAA GCTTGAGGCC GCCCATCAAG GCACGGTATT TCTGGATGAA
ATTGCTGAGT TGCCGCTATT GCAACAAACC AAGTTACTGA GATTTTTGCA GGAAGGCAGT
GTTAGCCGTT TAGGTCAGCA TGGGGAGTTA ACTCTGGATG TAAGGGTTAT TGCCGCTAGT
CACAAAGATT TGCAGCAAGA AGTGGCACAG GGGCGTTTTC GAGAAGACTT ATATTATCGC
CTCAATGTGG TGCCCATCAC AATGCCGCCC CTAAGGGAGC GCCAAGAAGA CATAGGCCGC
TTAGTGGAAC ATTTTTTGGG GTTACACCAA CGCAGTTATC AAGTGTCTGC CGCTAAATTG
AGTTCAAAGG CATTAAAACG CCTGTTAGAT TATCCATGGC CTGGCAATGT ACGTGAGCTT
GCAAACCGCA TGGAGCGTTT TGTGTTGCTC GGTGATGAAG AAGAATTGAT TGATGAGTTA
TCATTGAGCG CAGCTAAATC TTATGGCGGG GCCTCCCAGT TATCAACGTT TAGCTTACCT
GATGCTGGGA TTGACTGGGA AAGCTTTGAG AAAGACTGTC TAGCCCAAGC CCTAGCCAAG
TGTGAGGGCA ACAAGACTCA AGCGGCTAAG CTGTTAGCAT TAAGCTACAA GGCCTTTTTA
TACCGCTTAG AGAAGCATAA TTTAAATTAA
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| Protein sequence | MSKINQPTAH QAGIPTSTAM SILVVEDDET QRELIVQILS QSHYQIDSAD RVESAILKIK
ANPPDLVFSD WKLGQLTGMD LLNYVRREHP DMGFIIATAY GTITHAVDAM QAGADDYLTK
PYQRQSLLLS IGKVFKALTL KRHNRSLSSQ LSEQQALVGL VGKAACMQKV YDRLLRVGAT
DATVLIGGES GTGKELAARA LHQLSRRQHK PFVAINCGAI PDALAEAELF GAEKGAFTGA
TERKIGKLEA AHQGTVFLDE IAELPLLQQT KLLRFLQEGS VSRLGQHGEL TLDVRVIAAS
HKDLQQEVAQ GRFREDLYYR LNVVPITMPP LRERQEDIGR LVEHFLGLHQ RSYQVSAAKL
SSKALKRLLD YPWPGNVREL ANRMERFVLL GDEEELIDEL SLSAAKSYGG ASQLSTFSLP
DAGIDWESFE KDCLAQALAK CEGNKTQAAK LLALSYKAFL YRLEKHNLN
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