Gene Sden_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1361 
Symbol 
ID4017608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1581140 
End bp1582168 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content47% 
IMG OID637955358 
Productthreonine aldolase 
Protein accessionYP_562370 
Protein GI91792719 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000121527 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGATT TTAGAAGCGA TACAGTGACT CAGCCGACTC AGGCTATGCG CTTAGCCATG 
GCTAGCGCAG AAGTCGGTGA CGATGTTTAC GGTGATGACC CCACAGTTAA TGACTTACAA
GAGATGGCTG CCGACATGTT TGGTTTTGAC AGCGCCCTGT TTGTTAGTTC TGGCACCCAA
GCGAATCTTT TGGCTTTAAT GGCTCATTGT GAGCGCGGCG ATGAATATAT ATGTGGTCAG
CAAGCCCACA ACTATAAGTT TGAAGGCGGC GGGGCGGCGG TTCTTGGCAG CATACAGCCG
CAGCCACTGA CCAATCAAGC CGATGGAACA ATTTTACTGG CAGAGATAGC TGCTGCAATC
AAGCCCGATG ATGTGCACTT TGCCCGTACC CGCTTACTTA GCCTAGAAAA TACCATAGGC
GGCAAGGTGT TACCTCAAGC CTATCTGGCA CAGGCACAAA CCCTCGCATT TGATAAAGGA
CTTAAAATTC ATTTGGATGG TGCTAGAGTG GCAAATGCTG CCGTGGCTCA GGGCATCAAA
ATAAGTGACA TTACTCAATA CTTTGATTCA GTCTCTATTT GTTTATCTAA GGGCTTAAGC
GCGCCGGTGG GTTCAATATT GCTTGGGGAT GAACGTTTAA TTGCTAAGGC GGTACGTTGG
CGAAAAATGC TCGGCGGCGG TATGCGGCAA GTGGGCATTC TTGCCGCTGC AGCTAAGCTT
GCCTTAACAG AGCAAGTTGA GCGCTTAAGT GAGGATCATG CCAACGCGTT ATTCTTGGCA
CAAGGGCTTG CAGAAATGAC CGCGTTTTCT GTGGATTTAC AGCAAGTTCA AACCAATATA
GTGTTTGCAA CCTTGGATAA AAGTTACGAT CCAAAGCGGT TAACCCAGGC TCTTCTTAAG
TATAATATCC ACATCAGCGC CGGCACCACA GTGCGTTTTG TGACTCATAA AGATATTAGC
CAACAAGATG TATTGCATTT ACTCAAAGTG CTAACGCCTT GCCTCGCAGA GTCGAGATTA
GTTAAGTAA
 
Protein sequence
MIDFRSDTVT QPTQAMRLAM ASAEVGDDVY GDDPTVNDLQ EMAADMFGFD SALFVSSGTQ 
ANLLALMAHC ERGDEYICGQ QAHNYKFEGG GAAVLGSIQP QPLTNQADGT ILLAEIAAAI
KPDDVHFART RLLSLENTIG GKVLPQAYLA QAQTLAFDKG LKIHLDGARV ANAAVAQGIK
ISDITQYFDS VSICLSKGLS APVGSILLGD ERLIAKAVRW RKMLGGGMRQ VGILAAAAKL
ALTEQVERLS EDHANALFLA QGLAEMTAFS VDLQQVQTNI VFATLDKSYD PKRLTQALLK
YNIHISAGTT VRFVTHKDIS QQDVLHLLKV LTPCLAESRL VK