| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1359 |
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| Symbol | |
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| ID | 4017606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1579594 |
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| End bp | 1580421 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955356 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_562368 |
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| Protein GI | 91792717 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000124466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATAATT TAGAAGGCCT AATCGAGCAG GTTCCAGAAC TTGTTGTCAC CTACGGGCTT
AAAACCGTAC TGGCGATAGT GATTTTTTTC ATTGGTAAAT ATTTTGCTGG CGTGGCCAAA
AATGTCACCA CTAAGGTACT GACAAAGCGC AAGGTCGATC AAACCGTCGT TTCATTTGTG
GCCAATTTGG CTTGGGCATT AGTCTTCGTA TTCGCAGTCA TTGCAACCTT AGGTCAAATC
GGGGTGCAAA CGGCTTCATT GGTTGCGGTT ATTGGTGCGG CGGGTTTAGC CATAGGTTTA
GCGCTTCAAG GTTCATTATC AAATTTTGCA TCCGGTGTCT TGATGGTGAT ATTCCGTCCG
TGCCGCGTAG GGGATTATGT GGAGGCTGCT GGGATTGCAG GCGTAGTCGA TGAGATCACG
ATTTTTTCCA CTAAGCTGAA AACTGGCGAC AATAAACTTA TTATCGCGCC AAACTCATCC
ATGATGAACG GTACCATAGT CAATTATTCG GCGATGGATA AGCGCCGTAT TGATTTAGTG
ATTGGCGTTT CCTACAGCGC CGACATTAAG TTAACTAAGC AAGTGATAGA AAAAGTGTTA
ACGGCTCACA GTAAAGTCCT TGCTGAGCCA GGTTTTACCA TAGCGCTATC TGAGCTTGCT
AACTGTTCAA TCAATTTTGT GGTGCGTCCT TGGGTCAATA CTGCCGATTA TTGGCCTGTG
CGTTTTGAGC TATTAGAGCA AATTAAACTG GCTTTAGATG ACGCCAAAAT TGAAATTCCA
TTTCCTCAAA TGGATGTTCA TGTTAAAGGT TTGCCGGTGC AATCATGA
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| Protein sequence | MDNLEGLIEQ VPELVVTYGL KTVLAIVIFF IGKYFAGVAK NVTTKVLTKR KVDQTVVSFV
ANLAWALVFV FAVIATLGQI GVQTASLVAV IGAAGLAIGL ALQGSLSNFA SGVLMVIFRP
CRVGDYVEAA GIAGVVDEIT IFSTKLKTGD NKLIIAPNSS MMNGTIVNYS AMDKRRIDLV
IGVSYSADIK LTKQVIEKVL TAHSKVLAEP GFTIALSELA NCSINFVVRP WVNTADYWPV
RFELLEQIKL ALDDAKIEIP FPQMDVHVKG LPVQS
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