Gene Sden_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1358 
Symbol 
ID4017605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp1578944 
End bp1579573 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content43% 
IMG OID637955355 
ProductOmpA/MotB 
Protein accessionYP_562367 
Protein GI91792716 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000000000545475 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACGTT TAGCCTTAGG CCTATGGCTG GTTTTTTTTA GCTTCTCAGC CCTTGCTTGG 
GTTGATACTG ATGCAGACGG TGTACCGGAT AAGAAAGATG CTTGTGCCAA TAGCCCTAAA 
GGCGTCATAG TCGAGGCTAA CGGCTGTCAT CAGGTGGAAT TGTCCGTTCA GCAAGAGCCT 
GAAATTGAGC CGTCTGACTT TGACAGCATG GAACAAGTAC AAACAGCCGC AATAACACAA 
AACTGTGTAC TGGATGAAAC CTCTGAATTT AATTTAAGTG CTTGTGATAG CATTGATATA 
GCGCCTGTAT ATTTTGAATT CGCTAAATCT CAAGTATTGC AAACACAAAA GCCTTTGCTG 
AAAAAAATCG CTATGCTTGC CAATCAAAGC GGTGCGAAGA TAACCTTGGT TGGTCACACT 
GATATCATAG GTAGCGAAGC ATTTAATCAA AATTTATCAT TAAAGCGCGC CATGAATGTG 
AGTGCCGTAC TCGTGGCTGA GTATGGTTTA ATGGCATCTG ATATACATTA TTATGGTGTG 
GGTTCAACAG AGCCTGCCGA TGATAATGCC ACCGCGAACG GTCGTCAGGC CAATCGACGG 
GTTGAAATTA CCATAACATT AGAAGACTAA
 
Protein sequence
MLRLALGLWL VFFSFSALAW VDTDADGVPD KKDACANSPK GVIVEANGCH QVELSVQQEP 
EIEPSDFDSM EQVQTAAITQ NCVLDETSEF NLSACDSIDI APVYFEFAKS QVLQTQKPLL 
KKIAMLANQS GAKITLVGHT DIIGSEAFNQ NLSLKRAMNV SAVLVAEYGL MASDIHYYGV 
GSTEPADDNA TANGRQANRR VEITITLED