| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1357 |
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| Symbol | |
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| ID | 4017604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1577048 |
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| End bp | 1578517 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955354 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_562366 |
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| Protein GI | 91792715 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000317071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACG CTAAATCACA AGGAACCCTG CTTGGGCATC CTAAGGGATT GTTCCTGTTG
TTTACAACGG AACTCTGGGA GCGCTTTAGT TACTATGCTA TGCGCGCTAT CTTGGTATTG
TATCTAGTCG ATAAGGTACA AACTGAGGGT GGTCACGGTC TAGGTTGGAC ACAGGCCGAT
GCTTTATCTT TATACGGTAC CTTCACCGGC TTAGTTTATT TGACCCCGCT TATTGGTGGT
TGGCTTGCTG ATGCATTCTT AGGTCAACGT AAAGCAATTT ATATTGGCGG CGCCTTAATG
GCCATAGGCC AATTTACCTT AGCCTTACCT CATTCCTGGG TACCAGGCTC TGAAACCTTA
TTCTTCTACC TAGGTCTAGG TACGTTAATT TTAGGTAACG GTTTATTTAA ACCCAACATT
TCTACCATGG TAGGTGACTT GTACCAAGAA GGCGATCATC GCCGTGACGG TGCTTTCACC
ATTTTCTACA TGGGTATCAA CGTCGGTGCA GCACTTTCTG GTATCGTTGT CGGCTCAGTC
GTTGCAGCTT ATGACGGTAA CTGGCAGATG GGCTTCTTAT GTGCCGGTGT GGGTATGGTG
TTGTCCCTCA TCATCCAATA TGTGTACGCG CAAAAATTGC TGGGTGACAT AGGGACTGTA
CCTGCCGCTA GATTAGAGCG TGAGAAAAAT GAAGCTAAAG GTGAAGTCCG TAAAGAACCG
TTAACCAAAG TTGAACGCGA TCGCATCAAG GTCATCATGA TCATGGGTCT GTTCACCATT
ATTTTCTGGG CAGGATTTGA ACAAGCCGGT GGCTTGATGA ACTTATTTAC GAATAACTTC
ACCGATCGCA TGATCGGCAG CTGGGAAGTG CCCACCACTT GGTTCCAGTC TTTAAATGCA
GTGTTCATCG TGGTATTTGC GCCTGTTATT GCATCCATTT GGATACGTCT TGGTAAAAAT
GAGCCAAATT CACCGGTAAA GTTTGCTTTA GGCTTGGTTC TCCTTGCAGT AGGCTTCCTG
TTCATGATGG GCGCGGTCAT GGAAATGGGC GGCAACGCCG ATGCAAAATC TAGCATGTGG
TGGTTAGTCG GCGCTTATTT CTTCCATACC ATGGGTGAGC TGTGCTTATC ACCTATCGGT
CTTTCTATGG TGACTAAATT GGCTCCACTG CGTATCGCAT CATTAATGAT GGGTGCCTGG
TTCCTGTTTA TCGCTATTGC TAACAAAGTC GGTGGTTTAG TCGGCTCATT GATTGGCCAT
GGCGGTGAAG TTGAAGAACA GTTGGCCAAC GCTATGTCTA TCTTCGCAGG CATCGCAATT
ACCGCTGTAG TATCAAGTGT TATCTTATAC TTCATGGCGG ACAAGCTAGT GGATTGGATG
CACGGTGCAG AAACCAAAAA TCACACTGAG GAAGAAGCCT TGGAAGAAGA GATTGCTGTA
ACCGCTGAGC ACGAAGCCAT TAAGCGTTAA
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| Protein sequence | MNDAKSQGTL LGHPKGLFLL FTTELWERFS YYAMRAILVL YLVDKVQTEG GHGLGWTQAD
ALSLYGTFTG LVYLTPLIGG WLADAFLGQR KAIYIGGALM AIGQFTLALP HSWVPGSETL
FFYLGLGTLI LGNGLFKPNI STMVGDLYQE GDHRRDGAFT IFYMGINVGA ALSGIVVGSV
VAAYDGNWQM GFLCAGVGMV LSLIIQYVYA QKLLGDIGTV PAARLEREKN EAKGEVRKEP
LTKVERDRIK VIMIMGLFTI IFWAGFEQAG GLMNLFTNNF TDRMIGSWEV PTTWFQSLNA
VFIVVFAPVI ASIWIRLGKN EPNSPVKFAL GLVLLAVGFL FMMGAVMEMG GNADAKSSMW
WLVGAYFFHT MGELCLSPIG LSMVTKLAPL RIASLMMGAW FLFIAIANKV GGLVGSLIGH
GGEVEEQLAN AMSIFAGIAI TAVVSSVILY FMADKLVDWM HGAETKNHTE EEALEEEIAV
TAEHEAIKR
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