Gene Sden_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1345 
Symbol 
ID4017631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1564949 
End bp1565686 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content42% 
IMG OID637955342 
Productchemotaxis phosphatase, CheZ 
Protein accessionYP_562354 
Protein GI91792703 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG3143] Chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCAA AATTATCGGG GCTTATAACC CTCGAACAAG CCCAGCAACT TGTTACATTG 
CTTGAGGCGG GTGATCAAAG TTCGGCAGAT GATGTCATTA GAGAGCTCGC GGGGCCTTTG
CAACGTGAAC TCTTTGAAGA GGTCGGTAAG TTAACTCGGC AGCTTCATAG TGCATTAATG
GATTTTCAAG TCGATAACAG ATTAGTTGAA TTGGCCAATA CAGAAATACC AGATGCCAAG
GAAAGACTAA ACTATGTTAT TGAGATGACT GAACAAGCTG CAAATAAAAC CATGGATGCG
GTTGAAGAAT GCATCCCTTT GGCCGATAGC ATTATTATCA ATATTCATTC AGTTTCCCCA
AAATGGGAAA AGTTGATGCG TCGTGATATT GCCTTAGATG AATTTAAAGG CCTTTGTCAT
GATGTACAGA GTTTAATGTC TCATAGTCAG CATGATTCAA ATCGACTACG TGAACTCTTG
AATGAAGTAC TGATGGCACA AGATTTCCAA GATTTAACTG GACAGATGAT CCGCAGGGTC
ATTGATTTAG TTAGGGAAGT GGAAAATAAC CTAGTGTCCA TGCTCACAGT ATTTGGTGAC
ACTGCTATCG AAAGCACTCC TGTCGCTGAA AAGAATAAGA TAGAAGCTGA AGGACCGATA
ATGAACGCTG AATTACGTGA AGACGTGGTT ACAGGTCAGG ATGAAGTTGA TGATCTGCTA
TCGAGTCTGG GTTTCTAA
 
Protein sequence
MQAKLSGLIT LEQAQQLVTL LEAGDQSSAD DVIRELAGPL QRELFEEVGK LTRQLHSALM 
DFQVDNRLVE LANTEIPDAK ERLNYVIEMT EQAANKTMDA VEECIPLADS IIINIHSVSP
KWEKLMRRDI ALDEFKGLCH DVQSLMSHSQ HDSNRLRELL NEVLMAQDFQ DLTGQMIRRV
IDLVREVENN LVSMLTVFGD TAIESTPVAE KNKIEAEGPI MNAELREDVV TGQDEVDDLL
SSLGF