Gene Sden_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1335 
Symbol 
ID4017507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1555869 
End bp1556270 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content43% 
IMG OID637955332 
Productflagellar biosynthesis protein, FliO 
Protein accessionYP_562344 
Protein GI91792693 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAGATG TGTTATTAAG TTTCCCCCTT GTTGCAGCAG TGAATGCCGC AGTATCCCAA 
ACGCCAGCGC CTCTGATGAG TGCTGGTCAA GAGACATCTC ATATCGCTTC AATGGCCAGT
ATGGTGGGTG GCTTAATTGT GGTGCTGGCG ATCATTTTTG TGTTGGCTTA TATTGTGAAA
CGGCTCAACT TAGTGCCTTC TCAGCACAGT GTAATTAAAT CTATCGCCGT GGCTTCTATG
GGGCCAAAAG AAAAAGTGGT GTTGATTGAA GTCAATGGTA AGCAATACTT GTTAGGCGTT
ACAAGTTCAC AAATCAATTT AATTGAAAAA CTTGAAACTC AAGTCAAAGT CGAGAGTGAG
TCATTTGCTC AGCGGCTAAA ACAGGCTAAG GAGAGTCAAT AA
 
Protein sequence
MLDVLLSFPL VAAVNAAVSQ TPAPLMSAGQ ETSHIASMAS MVGGLIVVLA IIFVLAYIVK 
RLNLVPSQHS VIKSIAVASM GPKEKVVLIE VNGKQYLLGV TSSQINLIEK LETQVKVESE
SFAQRLKQAK ESQ