| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1334 |
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| Symbol | fliN |
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| ID | 4017506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1555390 |
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| End bp | 1555773 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955331 |
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| Product | flagellar motor switch protein |
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| Protein accession | YP_562343 |
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| Protein GI | 91792692 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTACAG AAGACACTGG TGATGATTGG GCTGCGGCCA TGGCCGAGCA AGCGATTGAA
GAAGCACAAC AAATAGAACT TGATGAATTA GTTGATGATT CTAGACCAAT AACCAAAGAG
GAAGCGGCTA AGCTTGATTC AATACTCGAT ATTCCTGTGA CTATTTCAAT GGAAGTGGGC
CGCAGTTTTA TCAGTATCCG TAACTTGCTT CAGCTTAATC AGGGATCTGT GGTTGAACTT
GATCGTGTCG CCGGCGAGCC GCTGGATGTG ATGGTCAATG GCACCCTGAT TGCCCATGGT
GAAGTGGTGG TGGTAAACGA TAAATTCGGT ATCCGATTGA CCGATGTTAT CAGCCAGACA
GAGCGTATTA AAAAGCTTAA ATAA
|
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| Protein sequence | MSTEDTGDDW AAAMAEQAIE EAQQIELDEL VDDSRPITKE EAAKLDSILD IPVTISMEVG
RSFISIRNLL QLNQGSVVEL DRVAGEPLDV MVNGTLIAHG EVVVVNDKFG IRLTDVISQT
ERIKKLK
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