Gene Sden_1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1331 
Symbol 
ID4017503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1552973 
End bp1553545 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content45% 
IMG OID637955328 
Productflagellar motor switch protein FliM 
Protein accessionYP_562340 
Protein GI91792689 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGATT TATTAAGCCA AGACGAAATT GATGCGCTGT TACACGGCGT TGATGATGTA 
GATGAAGATG ACGTCGATGA CGATGGCGGG GATGCGCGCT CCTATGACTT CTCTTCTCAA
GACAGGATTG TCCGTGGGCG TATGCCCACC CTTGAAATTG TCAACGAACG TTTTGCGCGT
CACCTTAGGA TCAGCATGTT TAACATGATG CGCCGAGCTG CAGAAGTCTC CATTAATGGC
GTTCAAATGT TGAAGTTTGG TGAATATGTA CACACTTTAT TTGTACCCAC CAGTCTTAAT
ATGGTGCGTT TTAGCCCATT GAAAGGTACT GCATTAATCA CCATGGAAGC GAGATTAGTC
TTTATCCTTG TGGACAACTT TTTTGGTGGT GATGGCCGTT TTCATGCGAA AATTGAAGGA
CGTGAGTTTA CGCCCACAGA GCGTCGAATT GTCCAATTGC TCCTTAAAAT AATTTTCGAG
GATTATAAAG AAGCCTGGGC ACCGGTCATG GATAATGGAA TGGACCCATC CACTTTTAAT
CGGCCTCGCA ATGGGCCACG ATGTAGTTGC TAA
 
Protein sequence
MSDLLSQDEI DALLHGVDDV DEDDVDDDGG DARSYDFSSQ DRIVRGRMPT LEIVNERFAR 
HLRISMFNMM RRAAEVSING VQMLKFGEYV HTLFVPTSLN MVRFSPLKGT ALITMEARLV
FILVDNFFGG DGRFHAKIEG REFTPTERRI VQLLLKIIFE DYKEAWAPVM DNGMDPSTFN
RPRNGPRCSC