Gene Sden_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1330 
SymbolfliL 
ID4017502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1552408 
End bp1552929 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content44% 
IMG OID637955327 
Productflagellar basal body-associated protein FliL 
Protein accessionYP_562339 
Protein GI162210776 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGATG AAGAATCGTT AGAACTAAAG AACGAAGGTA AAGGAAAGAG CAAGTTGGTT 
CTTTTTGGCG GTATAGGCCT AGTGTTAGTG CTTGTTATTG GCGCAGGTTT ATGGTTTTTG
ATGGGCTCAA GTGACGCCCC AGTTGCCGAC CCTGATTCAG ACCCGAGTTC AGCGGCAGCC
CCGGCAGTCA AAGCCCCTGT CGCAGAAGCT AACTATATCA GTATGCCAAG GCCATTTTTA
TTTAATCTTC CAGGTGCCGA TCGCCCTCGC ATTGTTGAAA TAAAAGTGCA GTTAATGGTT
CGTGGTAGTG ATGATGGGAC ATTAACCCAA AAGCATATTC CATTGATTGA AGATGCGCTA
TTAACGACTT TTAGTGGCGC AGATGTGCAA AAATTGAGTA CTCAAGCCGG TAAAGATGAA
TTAAGGCAAT TAGCGCTATT AAATGTGCAA AACACCTTGC AACCTGTCAT TGGACGTACT
GTGGTTGAAA AGGTGTTATT TACCGGCTTT GTGATGCAAT GA
 
Protein sequence
MADEESLELK NEGKGKSKLV LFGGIGLVLV LVIGAGLWFL MGSSDAPVAD PDSDPSSAAA 
PAVKAPVAEA NYISMPRPFL FNLPGADRPR IVEIKVQLMV RGSDDGTLTQ KHIPLIEDAL
LTTFSGADVQ KLSTQAGKDE LRQLALLNVQ NTLQPVIGRT VVEKVLFTGF VMQ