| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1328 |
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| Symbol | |
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| ID | 4017500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1550169 |
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| End bp | 1550615 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637955325 |
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| Product | flagellar export FliJ |
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| Protein accession | YP_562337 |
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| Protein GI | 91792686 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2882] Flagellar biosynthesis chaperone |
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| TIGRFAM ID | [TIGR02473] flagellar export protein FliJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.843025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATG ACCCGCTGTT TACTGTACTT AAACTGGCTT GTGAGGCGGA AGAAAAAGCG
GCTTTACAGC TTAAGTCTAC TCAATCAGAC AGGCAAAAAT ACCAAGCACA ATTGGATGTG
CTGAATAATT ATCGCCTCGA TTATATGAAG CAAATGTCAC AGCACCAAGG TCAAACCTTA
AGTGCGAACC ACTACTCGCA GTTTCATCAG TTCATCAAGC AAGTGGATAA TGCCATTACT
CAGCAAGTCA ATGCCGTTAA AGATGCGGAA ACACAAGTGC TTTACCGCCA ACATAATTGG
CAAGAAAAGC AGCAAAAAAG AAAAGCGGTA GAAATGTTGT TAGAACAAAA AGCGCTCAAG
CGGGCGCATA TTGAAAATGT TCGTGAACAA AAAATGTCTG ACGAATTTGC CATGCAGCAG
TTTATCCGTA AAAAGCCAAG GCATTAA
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| Protein sequence | MQNDPLFTVL KLACEAEEKA ALQLKSTQSD RQKYQAQLDV LNNYRLDYMK QMSQHQGQTL
SANHYSQFHQ FIKQVDNAIT QQVNAVKDAE TQVLYRQHNW QEKQQKRKAV EMLLEQKALK
RAHIENVREQ KMSDEFAMQQ FIRKKPRH
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