Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1326 |
Symbol | fliH |
ID | 4017498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1547661 |
End bp | 1548788 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637955323 |
Product | flagellar assembly protein H |
Protein accession | YP_562335 |
Protein GI | 91792684 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGAAT CGAAATTGAA TCGTTTTAAG CATGTACACA GTGTTGATGA TGAGCTTGAG TTCAGTCATT GGCACTTGCC AGATATGACA GATGACCAGC CTCAGGGTCC ATCAAACATG TTTGGTAAAA AACCTGCGCC ACATATCGCT GAAGAAACTA TTGAGGAAGA GCCCAAGCCG ATGACAATGG CACAACTCGA AGAGATGCGC GCCGTTGCAG AAAAAGACGG GTTTGATCAA GGTAAAGAAG AAGGTTATCA GACAGGGTTA GAGCAAGGAC GGCTCGAAGG CTTAGAGCAG GGTCATAAAG AAGGACTAGA ACAAGGTGAG CAGCAAGGTT TTGAAGCTGG TAAAGCTGAA GCCGATGCCT TAGTCATGCG TTTTAGCAGC ATAGTAGAAC AGTTTGAAAA GCCACTAACT GTGTTAGATC AAGAAATTGA GTTAGAGCTG TTGAACCTAG TATTGGCCTT AAGCAAAGCG GTTATCATCA ATGAAGTCAA AACCCATCCC GAGCATATTC TTGCGGTGCT GCGCCAAGGT ATCAATGCGT TGCCTATCAA AGAGCAGCAA ATAAAAATAC GCGTTAATCA GGAAGATGCG GAGCTTATCA GTCAATTCTA TAGCCAAGAG CAATTGGACA AGAATCGCTG GCAGCTCGAT GTCGACCCTG TTTTATCAAC GGGTGATTGC ATTATCGACA GTGTACGTTC AAGCGTAGAT TTAAGCGTTG AAGAGCGCAT GAGCCAAATA TTAGAAGACT TGAAGCAGAA ATCATTAGGC ATAGAAGCTA ACATTCTAAG CAATAAAGGT GATGATAAGG GCTATACCAC AGAGATAGTC GATGACACTT TGCCAAGTGC AGCTAAAGAA GCAGGCGAAT CTGTTCAAGG CTTAGAGTCA GCAGCACCTC AGGTTCAAGA CACACCAGTT CCTGAAATGG CAGAGGTTAT CGAAGAGGTT GATACAGCTA ACACTTCTGA AGTTGACAGC AGCGAAGCAT TAAAAAACCA TTTAGACCAA GGTAGAACCC CCGAGTTAGC AACAAACCCA CAGCAAGAGT CCCCGGTTGA CGATGACGTC GTTAAGGAGA ACAAGGATGC TCAGCCGTCA ACATCAACTC CTGAATAA
|
Protein sequence | MTESKLNRFK HVHSVDDELE FSHWHLPDMT DDQPQGPSNM FGKKPAPHIA EETIEEEPKP MTMAQLEEMR AVAEKDGFDQ GKEEGYQTGL EQGRLEGLEQ GHKEGLEQGE QQGFEAGKAE ADALVMRFSS IVEQFEKPLT VLDQEIELEL LNLVLALSKA VIINEVKTHP EHILAVLRQG INALPIKEQQ IKIRVNQEDA ELISQFYSQE QLDKNRWQLD VDPVLSTGDC IIDSVRSSVD LSVEERMSQI LEDLKQKSLG IEANILSNKG DDKGYTTEIV DDTLPSAAKE AGESVQGLES AAPQVQDTPV PEMAEVIEEV DTANTSEVDS SEALKNHLDQ GRTPELATNP QQESPVDDDV VKENKDAQPS TSTPE
|
| |