Gene Sden_1319 details

Gene Information

• Locus tag: Sden_1319
• Symbol: fliS
• ID: 4017491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1539302
• End bp: 1539712
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637955316
• Product: flagellar protein FliS
• Protein accession: YP_562328
• Protein GI: 91792677
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1516] Flagellin-specific chaperone FliS
• TIGRFAM ID: [TIGR00208] flagellar biosynthetic protein FliS

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAGTT CTTTGCAATC GTATCGAAAA GTATCATTAG ATAATGAAAT TTCGATCGCT 
TCACCTCATA GAGTTGTACA GTTGATGTTT GCTGGTGGGT TAGAACGTTT GGCTCAGAGC 
CGTTATGCAA TAGAAAATAA AGATATGGCA AATAAAGGGA TTTTTATTGG TAAAGCGATA 
GGGATCATTA ATGGCCTAAA TAATAGTTTA GATATGAATG CAGGTGGTGA AATCGCAAAA 
AATTTAAGTG ACTTGTATGA TTTTATGCTT AGAAAAATCA CAGAAGCGAA CATAAATAAT 
GATGTAAAAG CGATAGATGA TGTGTGTGAT ATATTACGAG AAATTAAAGA AGCTTGGGAT 
GCCATCCCAC AAGATAAGCA CCATATATCT GCTCATTCTG AGAAAAACTA A 

 

Protein sequence

MRSSLQSYRK VSLDNEISIA SPHRVVQLMF AGGLERLAQS RYAIENKDMA NKGIFIGKAI 
GIINGLNNSL DMNAGGEIAK NLSDLYDFML RKITEANINN DVKAIDDVCD ILREIKEAWD 
AIPQDKHHIS AHSEKN