Gene Sden_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1314 
Symbol 
ID4017308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1534637 
End bp1535458 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content41% 
IMG OID637955311 
Productflagellin-like protein 
Protein accessionYP_562323 
Protein GI91792672 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTA CAGTTAATAC TAACGTAACG TCAATGAAAG CACAGAAGAA TCTGAATATA 
TCAAGTGGTG GTCTAGCTAC TTCGATGGAG AGATTGTCTT CAGGCTTGAG AATTAATAGT
GCTAAAGATG ATGCTGCTGG TCTGGCCATT TCAAACCGCT TGAACTCACA AGTTCGTGGT
TTGGATGTGG GCATGCGAAA CGCCAATGAT GCAATTTCAA TTGCACAGAT TGCAGAAGGC
GCGATGCAAG AGCAGACTAA TATGCTACAA CGCATGCGTG ATCTAGCTAT TCAATCGGAA
AACGGCGCTA ATAGTGCTGA TGATTTAACT GCATTAAAAG CTGAAATGGA TCAGTTGGTT
ACAGAAATAA CGGCAATAGG TAACAGTACT GCGTTTGGTA ATACCAAACT AATGACTGGA
ACATTCTCGA CGGGTAAACT ATTCCAAGTA GGGCATCAAG AAGGGGAAGA TGTTACTGTT
AAAGTTAACA CTAACAATGC AACGTCCTTA TCAGTGGGAG CATTAACAGT ACTAACCTCT
GCGGGGCGAA ATTCTGCTCT GACTAAAATT GATGCAGCCA TTAAAAAAAT TGATACACAA
AGAGCAGAAT TAGGTGCGGT TCAAAATAGA CTGTCACATA ATATCAGCAA CAGTGCCAAT
ACTCAGGCTA ACGTAGCAGA TGCAAAAAGT CGCATTGTAG ATGTAGATTT TGCAAAAGAA
ACTGCGACGA TGACTAAGAA TCAGGTTCTA CAGCAAACAG GTTCAGCCAT GCTAGCGCAA
GCAAATCAAC TTCCCCAAAT AGCATTGTCT TTATTGGGTT AG
 
Protein sequence
MAITVNTNVT SMKAQKNLNI SSGGLATSME RLSSGLRINS AKDDAAGLAI SNRLNSQVRG 
LDVGMRNAND AISIAQIAEG AMQEQTNMLQ RMRDLAIQSE NGANSADDLT ALKAEMDQLV
TEITAIGNST AFGNTKLMTG TFSTGKLFQV GHQEGEDVTV KVNTNNATSL SVGALTVLTS
AGRNSALTKI DAAIKKIDTQ RAELGAVQNR LSHNISNSAN TQANVADAKS RIVDVDFAKE
TATMTKNQVL QQTGSAMLAQ ANQLPQIALS LLG