Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1306 |
Symbol | flgE |
ID | 4017300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1525388 |
End bp | 1526755 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637955303 |
Product | flagellar hook protein FlgE |
Protein accession | YP_562315 |
Protein GI | 91792664 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTTA ACATTGCACT CAGTGGCATT GCTGCCGCGC AGAAAGACTT AAATACAACA GCAAATAATA TTGCGAACGT TAACACTATC GGTTTTAAAG AGTCGCGAGC AGAATTTGCT GACGTTTATG CTAATTCTAT TTTCTCTAAT GGTAAGACAG CAGTGGGTGG CGGGGTAACC ACGACCCAAG TGGCGCAGCA ATTCTCTCAA GGCAGCCTGC AATTTACCAG TAATGCATTA GATTTGGCGA TTAGTGGTGG TGGCTTTTTT GTCACTTCTG CCAATATCGA TACCTCTCAA GATCAATCTT TTTCACGAGC TGGTGCATTT AAAGTTGATT CAAATAATTA CATGGTGGAC TCGGCAGGTA ATTTTTTGCA AGCATTCCCA GTGGATGAAA CTGGTAGCTC AACCTCAGTG AGCTTAACAA CCACCAAACC TGTGAAAATA CCTGATACTG CAGGTAGTCC GGTAAAAACA AGCTCTATTG GCATGCAGAT GAATTTAAAC TCAGGTGACA AGGTGTTAGA TCCAGCAGCA TTCGATCCAA CAGATTCTAA AACATTCAAT AAGTTAACGT CTGTAACTAT GTTTGATTCA TTAGGTGAAT CTCATGTTAT GACCAGCTAC TTTGTGAAAC CCACCAATGG CTCATATACA GGTGAAAGTA ACTGGGTTGT CTTCTATGCT GTAGATGGTA AACAGGTTGA CCTTGCTGGG ACTGATGTTG GTACCTATCA GACAGATACC GATGGCGATC GTATCGCTGA TACGCCACAG CTCGCTCAAA CGGCTGGTGG CTGGCGTGGA TCTGTGCTTA AGTTTAATGA TGTAGGCGCC TATACTGGCA GCGATCCAGC AGTACTAACC ACTGAGGCCT TAGGGTTACC TGGCGCAGGT ATTTTAGGCC CAGGCGCCGA TGGTACCCAA ACACTGAGTA TCGCGTTTAA TAACCCCACT CAATACTCAT CAAACTTTGA AGTGACAGAG CTTACCCAAA ACGGCACTAC AGTTGGCCGC TTAACTAACG TCTCCATTGG CTCCGATGGA CTGGTGATCG CTAAGTACAG TAACGGCTCT ACAGTGCCAC TAGCTCGAGT AGCCTTAGTG CGTTTTGCCA ACGAGCAAGG GTTGACTCAG GTGGGAAATA CCTCTTGGAA AGCCAGCTTA GATTCAGGCC CGGCGCTTGC GGGTGAAGCT AATAGCGGCA CATTTGGTAG CATTCGTTCA TCAGCTTTAG AGCAGTCGAA TGTTGATTTG ACCACAGAGC TTGTAGATTT AATCTCTGCT CAGCGTAACT TTCAGGCGAA CTCGAGAACC TTAGAAGTGA ATAATACCTT GCAGCAAACC ATACTGCAGA TCCGCTAA
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Protein sequence | MSFNIALSGI AAAQKDLNTT ANNIANVNTI GFKESRAEFA DVYANSIFSN GKTAVGGGVT TTQVAQQFSQ GSLQFTSNAL DLAISGGGFF VTSANIDTSQ DQSFSRAGAF KVDSNNYMVD SAGNFLQAFP VDETGSSTSV SLTTTKPVKI PDTAGSPVKT SSIGMQMNLN SGDKVLDPAA FDPTDSKTFN KLTSVTMFDS LGESHVMTSY FVKPTNGSYT GESNWVVFYA VDGKQVDLAG TDVGTYQTDT DGDRIADTPQ LAQTAGGWRG SVLKFNDVGA YTGSDPAVLT TEALGLPGAG ILGPGADGTQ TLSIAFNNPT QYSSNFEVTE LTQNGTTVGR LTNVSIGSDG LVIAKYSNGS TVPLARVALV RFANEQGLTQ VGNTSWKASL DSGPALAGEA NSGTFGSIRS SALEQSNVDL TTELVDLISA QRNFQANSRT LEVNNTLQQT ILQIR
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