Gene Sden_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1304 
SymbolflgC 
ID4017298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1524075 
End bp1524491 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content43% 
IMG OID637955301 
Productflagellar basal body rod protein FlgC 
Protein accessionYP_562313 
Protein GI91792662 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAT TTAATATTTT TGATGTTTCA GGATCGGGTA TGGCGGCCCA GTCCATACGC 
TTGAATACCA CGGCAAGTAA TATCGCCAAT GCGGATTCTG TTTCAAGCAG CGTAGATAAG
ACGTATCGAG CTCGGCACCC CATTTTTGAA GCTGAACTTA ATAAGGCTCA CGATCAACAA
AATGGCACTA AAGGTGTCCA GGTTAGGGCT ATCGTGGAAA GTGATAAACC TTTACTCAAG
GAATATTCTC CAAGTCATCC TATGGCCGAT GGTGATGGTT TCATCTACAA ACCGAATGTG
AATGTCATGG AAGAAATGGC TGATATGATT TCAGCATCTC GTTCATACCA AATGAATGTC
CAAGTTGCCG ATGCGACTAA AACCATGCTG CAGCAGACAC TTAGGATGGG TAAATAA
 
Protein sequence
MSLFNIFDVS GSGMAAQSIR LNTTASNIAN ADSVSSSVDK TYRARHPIFE AELNKAHDQQ 
NGTKGVQVRA IVESDKPLLK EYSPSHPMAD GDGFIYKPNV NVMEEMADMI SASRSYQMNV
QVADATKTML QQTLRMGK