Gene Sden_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1295 
Symbol 
ID4017583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1516646 
End bp1517860 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content43% 
IMG OID637955292 
Producthypothetical protein 
Protein accessionYP_562304 
Protein GI91792653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAC AGGAATTCAA CTTTTCTCAA CGCAAACTTA AGCCACTTAA GCGTCATATT 
ACTCTTGCCT TAGTCAGCCT TTGTAGTTTG ATATTTATCA CTCAAGCTTA TAGCGAGCAA
ATTGAGGTCA CTGGCAAAGC CCGTATTGTA AATGATGATT TTGACAAGGC TCGGGAAGAT
GCCATAAGTC AGGCCTTAAA TTACGCTAGC TTAAAAGCAG GGGTTAATTT CAACAGCGAG
CAAAAAATAG AACAAGGCAG ATTGACTCAG GATTCTTTCT CTATGCAAAG AATGGGCGTA
GCCGATAACA TCGTCTTGGT CAGTGAGTCA GTCAGAAATA ATATTCTTAC TGTAGTGCTA
GCCCTTGAGC TTTCAGATCA AGAAACCAAT GCCCAGTGTC AAAAGCAAAC CTTAAAAGCC
GCCATCATCT TGCCACAGGC ATTAATCGCC GACAGATCTC AACTTAGGTA TGGTCAGCTC
GCGAAATTTG AGCAAGCTGT ATCTCAAAAA TTAGGCAATG TTATCAATGC TCAATCAAAT
TATAGCTTTA TGCGAATTCA CGCCAATGAG AAACTCGACC AAGCTAATAC TTTATCGAAT
TTTAAAGGCT ACCGGATCCC GACATGGTTG GGTGAAATCA CCGACAGTCA GTACTTACTC
CAACCTGAGA TTTTAGATAT TTCATTGCAA GAAGGCCGTA GTTCCTATTT AGGCTTTGTG
TCTGAACCCG CCATTAGGCA ATTCAGCTTT AAACTTACCT TGTACCATGG GATCAGTGGC
GAAATCGTCT GGAGTAAATC CTTTTCAGAC ACTGCTCCGT GGGAATTTGA GCTTCAGGAA
ACGGTTTCCC CTAGTAGTCA GCATTTCTGG GATTCCGCTT ATGGACAAAG CATGATCCAA
CTTTTTCAAG AAAGTAGCCT GTCACTGGAT GAGGAGCTAA GTTGCCGCCC GCTACTGGGG
CAGATCATCG CTCGCCAAGG AGAAAGGATT ATTATTAACC TTGGCCGCAA AAATGGTGTG
CAAACCGGTG ATAAATTTCA AATTATCCTG CAGCAGAACA TCCCTGACAG GCTCAACAAC
ATGAGAACCA TAGCAACCCA GAGCCAAACC AGTATCACTA TTGATCAAGT GTCGGAAGAC
ACAGCCACTG CGGCCATAGT TGGCATGGGC GCTGCTGATA ATATTCAGCT ACAAGATATT
GCCCTTAAAC TATAG
 
Protein sequence
MKAQEFNFSQ RKLKPLKRHI TLALVSLCSL IFITQAYSEQ IEVTGKARIV NDDFDKARED 
AISQALNYAS LKAGVNFNSE QKIEQGRLTQ DSFSMQRMGV ADNIVLVSES VRNNILTVVL
ALELSDQETN AQCQKQTLKA AIILPQALIA DRSQLRYGQL AKFEQAVSQK LGNVINAQSN
YSFMRIHANE KLDQANTLSN FKGYRIPTWL GEITDSQYLL QPEILDISLQ EGRSSYLGFV
SEPAIRQFSF KLTLYHGISG EIVWSKSFSD TAPWEFELQE TVSPSSQHFW DSAYGQSMIQ
LFQESSLSLD EELSCRPLLG QIIARQGERI IINLGRKNGV QTGDKFQIIL QQNIPDRLNN
MRTIATQSQT SITIDQVSED TATAAIVGMG AADNIQLQDI ALKL