Gene Sden_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1293 
Symbol 
ID4017580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp1514036 
End bp1514761 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content41% 
IMG OID637955289 
Producthypothetical protein 
Protein accessionYP_562302 
Protein GI91792651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCCA CGTATTTGCC TTGGATGGGG TATTTTGACC TCATTGACAT TGCGGACAAA 
TTTGTATTTT TGGATAATGT GCAGTTAGAG CGCAGTGGAT GGCAAGTGAG AAACCGCATA 
CGTTCATCGC AGGGGGAACT TATGCTCAGG GTCGCTATTG CGACCCCTAA AAGATTCGAT 
GAGACATTAA TACATCAGAC CCAATTCGTT ACTGGTCATC CTTGGCGTAA AAAGCATTTA 
AAAAGTATTC AAATGAACTA CCAAAAGGCA CCTTATTTTG CCCAGGTTTA CCCCTTGTTA 
GAGAGCCTTT ATCAAAAAGA TGAAACCTCT CTCAGTCAAT TTAATATTAG TGTCATTAAC 
GCGCTGTGCA CTTTTATGGG TATAAACACG CCTAGAATGC TAGCGTCTGA ATTAGTCGAT 
ATAGAAGGTA TTAAAGATGC GCGGCTGACC TCTATATGCA AACACTTAGA TGCAGATCAA 
TATTTATCTC CCTTGGGGGC CATGGCCTAC ATAGAACAAG AGTCTTCAGG TGGGGATTTG 
GGGGAAAATG GCATCGATGT TTTTTATCAT CAGTTTGTAC ATCCACAATA TACACAGGTA 
TATGATGGTT TCATCTCGCA CCTTAGCATC ATAGACGCCT TATTTAATTT AGGGCCCCAA 
AACACGGTGA CATTAATTCG CCAATTTCGA CAAGCACCAA TTAATTACAC AAGCCTTCCA 
AGATGA
 
Protein sequence
MQPTYLPWMG YFDLIDIADK FVFLDNVQLE RSGWQVRNRI RSSQGELMLR VAIATPKRFD 
ETLIHQTQFV TGHPWRKKHL KSIQMNYQKA PYFAQVYPLL ESLYQKDETS LSQFNISVIN 
ALCTFMGINT PRMLASELVD IEGIKDARLT SICKHLDADQ YLSPLGAMAY IEQESSGGDL 
GENGIDVFYH QFVHPQYTQV YDGFISHLSI IDALFNLGPQ NTVTLIRQFR QAPINYTSLP 
R