| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1287 |
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| Symbol | |
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| ID | 4017574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1507999 |
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| End bp | 1509144 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637955283 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_562296 |
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| Protein GI | 91792645 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | [TIGR03588] UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCCCCT ATGGCAAGCA GCACATATCC CAGCAAGATA TTGATCTAGT AGTGCAAGTG
TTGAAGTCGG ATTATCTTAC CCAAGGCCCA AAAGTACCTG AGTTTGAGCG TGTGTTATGT
AGTTATACAG ATGCCAAGTA TTCGGTCGTT TTTAATAGTG CAACCTCTGC GCTTCATATC
GCCTGCTTAG CGTTAAATGT TGGGCCTGGT GATCTGGTAT GGACCAGTCC GATTACCTTT
GTCGCCTCAG CCAATTGCGC ATTGTATGCG GGGGCCGATA TTGATTTTGT TGACGTTGAC
TTTGCCACTG GAAATATGTC CGTCGATGCC TTAGCTACTA AGTTAATAAA GGCAAAAGAA
GCAGGGCGAT TGCCTAAGGT GATTATTCCT GTGCACTTAG CTGGTCACAG TTGTGATATG
GCAGCAATTC ATGCCTTGGC ATCTCAGTAT TCTATTAAGA TAATAGAAGA TGCTTCTCAC
GGTATTGGTG GGCACTTTGG TTCAAAAAAA ATCGGCGCCT GCCAATACAG CGATATTTGT
ATTTTTAGTT TTCATCCGGT GAAAATTGTC ACCAGCGCAG AAGGCGGGGC CGCCATGACC
AATAGTCATG AGATAGCCGA AAAAATGCGC TTACTTAGAA GCCATGGCAT TGTGAAAGAC
ACTCAGCATT TGTTAAGGCC GGATGAAGGG GATTGGTATT ATGAGCAGCA AGATTTAGGC
TTTAATTACC GTATGACCGA ATTGAGTGCC GCCCTTGGGA TCAGCCAAAT GAGCAATATC
GATGCCTTCG TTGCTAAGCG CAATGAGTTG GCAAGTGATT ATTGCAGCCA ATTAGCAGAT
TTACCCTTAA TGACGGTTAC TCCTATCGAG AATAGTCATA GTGCCTACCA TTTACAAATT
GTCTTGTTCG ACAAAGATAT AGATAGAAAG CAAGTGTTCA ATTCCATGCG TGCGGCTAAT
ATTATGGTGC ATGTGCATTA CTTTCCGGTG CATTTACAGC CGTATTATCT TTCCCTTGGT
TTTAAAGAAC ATGACTTCCC GCAGGCCGAA GCCTATTATC GCCAGTGTTT AACCTTGCCA
TTATTTCCTG ATTTGACGTC GGAACAACAA AGGTTTGTTA TTGATGAACT TAAAAGGTGC
TTGTAA
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| Protein sequence | MIPYGKQHIS QQDIDLVVQV LKSDYLTQGP KVPEFERVLC SYTDAKYSVV FNSATSALHI
ACLALNVGPG DLVWTSPITF VASANCALYA GADIDFVDVD FATGNMSVDA LATKLIKAKE
AGRLPKVIIP VHLAGHSCDM AAIHALASQY SIKIIEDASH GIGGHFGSKK IGACQYSDIC
IFSFHPVKIV TSAEGGAAMT NSHEIAEKMR LLRSHGIVKD TQHLLRPDEG DWYYEQQDLG
FNYRMTELSA ALGISQMSNI DAFVAKRNEL ASDYCSQLAD LPLMTVTPIE NSHSAYHLQI
VLFDKDIDRK QVFNSMRAAN IMVHVHYFPV HLQPYYLSLG FKEHDFPQAE AYYRQCLTLP
LFPDLTSEQQ RFVIDELKRC L
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