| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1273 |
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| Symbol | |
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| ID | 4017541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1487218 |
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| End bp | 1491099 |
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| Gene Length | 3882 bp |
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| Protein Length | 1293 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637955269 |
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| Product | phosphoribosylformylglycinamidine synthase |
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| Protein accession | YP_562282 |
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| Protein GI | 91792631 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
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| TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000193442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATCA TTCGCGGAGC CCCTGCACTC TCAGCTTTTC GTGTACAACA ACTCATGAAA
GCCTGCGATG CCGCGGCGAT ACCTGTAAGG CACATATATG CTGAATTCAT GCATTTTGCC
CATTTAACCA ACGCACTTAA TGATACACAA ACCCTTCAAC TAGCAAGCAT TCTCACCTAC
GGCCCCGCCA TCGAGGCCCA TACGCCAAAA GGCCAGCTTT ATTTAGTCAC ACCTCGTCCG
GGTACCATTT CTCCTTGGTC ATCGAAAGCG ACCGATATTG CCCATAATTG TGGCCTAAGC
CAGATTAAGC GTCTCGAACG CGGCATCGCC TATTATGTCG AGGCCGATAC TCTGGATGCC
AGCCAGCAAA AGGCGTTGCA GGCCCTGCTT TATGATCGCA TGGTGGAGGT GATTTTCGAT
GATATGGCAG CCGCCGAAAC CTTATTTGAT CGCACTGAAC CCAAAGCGTT AGCAAGCGTT
AATGTGCTGG GTGAAGGACG ACGGGCACTG GAAGTGGCTA ACAGCCGCCT AGGCCTCGCC
TTGGCAGAAG ATGAAATTGA CTACCTAGTG GACAATTTTG TGCGCCTCAA ACGTAATCCC
AATGACATCG AATTGATGAT GTTTGCTCAG GCAAACTCTG AACATTGCCG TCATAAAATA
TTTAATGCCG ACTGGACTAT CGATGGTGTG GTGCAAGATA AATCATTATT TAAGATGATT
AAAAACACCT ATGCCGTCAC GCCTGACAAC GTGTTATCCG CTTATAAAGA TAACGCTGCG
GTCATGACAG GCTCTGTGGC TGGGCGTTTC TTCCCCGATG AAACCGGGGT ATATGCTTAT
CATGTTGAGC CATGCCATAT TTTAATGAAG GTGGAAACCC ACAATCACCC AACCGCCATT
AGCCCTTATG CGGGCGCCGC TACAGGTTCG GGCGGTGAAA TTCGCGATGA AGGCGCAACC
GGGCGCGGCT CTAAGCCCAA AGCGGGCTTA GTGGGGTTTA GCGTATCAAA CTTAAATATC
CCAGGGTTTA TACAGCCATG GGAAGCACAA TACGGTAAGC CTGAACGCAT AGTCACGCCA
CTTGAAATCA TGTTAGAAGG TCCACTTGGC GGCGCGGCGT TTAATAACGA GTTCGGCCGT
CCTGCGTTAG TGGGTTATTT CCGTACCTAT GAGCAGGAAG TCAGCAGTCA CAATGGTGTC
GAAGTACGCG GCTATCATAA GCCCATCATG CTGGCCGGCG GTCTTGGTAA CATACGTGAA
GATCATGTGC AAAAGGGTGA GATCACCGTT GGCGCTAAGC TAATCGTGCT TGGTGGCCCT
GCGATGAACA TAGGTTTAGG CGGCGGCGCG GCATCTTCGA TGGCGTCGGG TCAATCCAGT
GAAGATTTAG ATTTTGCTTC AGTGCAGCGT GAAAACCCAG AGATGGAGCG TCGCTGTCAG
GAAGTTATCG ACAGATGTTG GCAGCTCGGT GACGACAACC CCATTCAGTT TATTCATGAC
GTGGGCGCTG GCGGGTTATC CAACGCCTTC CCTGAACTGG TTAATGATGC AGACAGGGGC
GGGCGTTTTA ATTTGCGCAA TGTCCCTTCA GATGAGCCTG GCATGAGCCC ACTTGAAATT
TGGTGTAACG AATCTCAAGA GCGTTACGTG CTTTCGGTTG CCCCAGAGAA CCTGGCCCGA
TTCGAGCAAA TTTGTCTGCG TGAACGGGCG CCATTTGCGG TGGTGGGTGA AGCCACCAGT
GAGCAGCATT TAACCTTGGC GGACAGTCAC TTTAACAACA AGCCTATCGA TTTACCTCTT
GAAGTCTTAT TGGGTAAAGC CCCTAAGATG AGCCGTGATG TGGTGTCGAA AAAAGCGCTG
TCTCCTGCGC TTGATGAATC ACAAATCACT GTGGATGAAG CGGTCACTCG CATATTAAGT
TTGCCGACGG TTGCCGATAA GTCGTTTCTT ATCACCATTG GCGATCGCAG CGTCACAGGC
CTTGTGAATC GCGACCAAAT GGTCGGCCCT TGGCAGGTAC CTGTGGCAGA TTGCGCCGTT
ACAGCTGCAA GTTTTGATAC CTATGCCGGT GAAGCCATGT CTATTGGTGA GCGTACGCCG
CTGGCGTTAC TGGACTTTGG CGCTTCGGCC CGTATGGCGG TGGCCGAATC CATCATGAAT
ATTGCCGGCA CGGATATTGG CTCATTTAAG CGCATTAAAC TTTCTGCGAA CTGGATGTCA
GCAGCAGGGC ACCCTGGTGA AGATGCGGGC CTCTATGAAG CAGTAAAAGC CGTGGGTGAA
GAATTATGCC CACAGCTTGA AATCACCATC CCGGTGGGTA AAGACTCAAT GTCGATGAAA
ACGGCCTGGG AAGACAATGG GGTGCATAAG TCTGTGACTT CGCCTATGTC GTTGGTTATC
ACTGCCTTTG GTGTGGTGCA AGACATTCGC AATACTGTTA CCCCTGAGCT TCGTAGTGAT
AAAGGCGACA CCGCCCTCTT GTTGCTTGAT TTAAGCCATG GCAAAACCCG TTTAGGTGGC
TCTTGCCTCG CCCAAGTGTT TTCAAGCTTA GGGGATGTGG CGCCAGATCT TGATGACAGT
ACGACCCTTA AAGGCTTCTT CGAGGTGATG CAGACCTTAG TGGCTGATCA GTCGATATTG
GCTTATCACG ACAGAAGTGA TGGCGGCTTA TTCACTACTG TGACTGAGAT GGCGTTTGCC
GGTAACACTG GGGCTGAAAT TGATTTGAGC GCGCTTCAAG GCTCAGATCT TGCCAGACTC
TTTAATGAGG AACTCGGCGC CGTTATCCAA GTGAGTCAAG CGCAAGCTGA AGCTATCACG
GCGCAATTTA TTGCCGCAGG CGTTGCTTGT CATGCTATTG GCGGCTTAAC TGAGCACAAT
AAACTGGTTG TTAAAGATGG CTCACGGGTG GTGTTCCAGC AGCAGCGAAG CGAGCTTCGC
CGCCTTTGGT CGCAAACCAG CTATAAGATG CAGGCATTAA GGGATAACCC AGATTGCGCC
TTGGAAGAAT TTAGCCTTAA GCAAAGTGAA ACTGACCCGG GCTTAACCGT TAAACTGAAT
TTTGACCCAA GCCAAGATGT GGCAGCGCCT TATATTCTTA AAGGCATAGC GCCTAAGATG
GCCATTCTAC GTGAACAAGG GGTTAACTCT CACGTTGAAA TGGCAGCGGC CTTTGACAGA
GCTGGCTTTG AAAGTCGCGA TGTGCACATG TCAGATATTT TATCGGGCCG CATCAGTCTC
GATGAATTCC AAGGATTGGT TGCCTGTGGC GGCTTCTCCT ACGGTGACGT ATTGGGCGCA
GGGGAAGGTT GGGCGAAATC CATTTTGTTT AACCAAAGAG CCAGGGATGA GTTTTCACGC
TTCTTTGAGC GAGATTTAAG CTTCGCCTTA GGGGTCTGTA ATGGTTGTCA GATGTTATCT
AACCTTAAGG AAATTATTCC AGGCAGTGAG CATTGGCCGC GATTCGTGCG TAACCGCTCT
GAGCGCTTCG AAGCTAGGGT GAGCTTAGTG GAAGTGCAGC AAAGCCCATC GCTGTTTTTT
GAGGGAATGG CGGGGTCAAG AATGCCCATC GCCGTGTCTC ATGGTGAAGG CTTAGCCGAG
TTCGCCTCAA TGCAGGCGAT GACAGCTGCT GAAAGCACAG GCACTGTGGC ACTGCGCTAC
GTGACGGGCA CTGGCGAAAT TGCGACTCAA TACCCACAAA ACCCTAACGG TTCACCGAAC
GGTTTGTCCG GCATCTGCAG CACAGATGGC AAAGTGACTA TTATGATGCC GCATCCTGAG
CGAGTGTTCC GCACAGTCGC CAACTCTTGG CATCCAGATA ACTGGGGCGA AGACAGCCCT
TGGATGCGCA TGTTCCGCAA TGCGCGGGTC AAGTTAGGCT AA
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| Protein sequence | MEIIRGAPAL SAFRVQQLMK ACDAAAIPVR HIYAEFMHFA HLTNALNDTQ TLQLASILTY
GPAIEAHTPK GQLYLVTPRP GTISPWSSKA TDIAHNCGLS QIKRLERGIA YYVEADTLDA
SQQKALQALL YDRMVEVIFD DMAAAETLFD RTEPKALASV NVLGEGRRAL EVANSRLGLA
LAEDEIDYLV DNFVRLKRNP NDIELMMFAQ ANSEHCRHKI FNADWTIDGV VQDKSLFKMI
KNTYAVTPDN VLSAYKDNAA VMTGSVAGRF FPDETGVYAY HVEPCHILMK VETHNHPTAI
SPYAGAATGS GGEIRDEGAT GRGSKPKAGL VGFSVSNLNI PGFIQPWEAQ YGKPERIVTP
LEIMLEGPLG GAAFNNEFGR PALVGYFRTY EQEVSSHNGV EVRGYHKPIM LAGGLGNIRE
DHVQKGEITV GAKLIVLGGP AMNIGLGGGA ASSMASGQSS EDLDFASVQR ENPEMERRCQ
EVIDRCWQLG DDNPIQFIHD VGAGGLSNAF PELVNDADRG GRFNLRNVPS DEPGMSPLEI
WCNESQERYV LSVAPENLAR FEQICLRERA PFAVVGEATS EQHLTLADSH FNNKPIDLPL
EVLLGKAPKM SRDVVSKKAL SPALDESQIT VDEAVTRILS LPTVADKSFL ITIGDRSVTG
LVNRDQMVGP WQVPVADCAV TAASFDTYAG EAMSIGERTP LALLDFGASA RMAVAESIMN
IAGTDIGSFK RIKLSANWMS AAGHPGEDAG LYEAVKAVGE ELCPQLEITI PVGKDSMSMK
TAWEDNGVHK SVTSPMSLVI TAFGVVQDIR NTVTPELRSD KGDTALLLLD LSHGKTRLGG
SCLAQVFSSL GDVAPDLDDS TTLKGFFEVM QTLVADQSIL AYHDRSDGGL FTTVTEMAFA
GNTGAEIDLS ALQGSDLARL FNEELGAVIQ VSQAQAEAIT AQFIAAGVAC HAIGGLTEHN
KLVVKDGSRV VFQQQRSELR RLWSQTSYKM QALRDNPDCA LEEFSLKQSE TDPGLTVKLN
FDPSQDVAAP YILKGIAPKM AILREQGVNS HVEMAAAFDR AGFESRDVHM SDILSGRISL
DEFQGLVACG GFSYGDVLGA GEGWAKSILF NQRARDEFSR FFERDLSFAL GVCNGCQMLS
NLKEIIPGSE HWPRFVRNRS ERFEARVSLV EVQQSPSLFF EGMAGSRMPI AVSHGEGLAE
FASMQAMTAA ESTGTVALRY VTGTGEIATQ YPQNPNGSPN GLSGICSTDG KVTIMMPHPE
RVFRTVANSW HPDNWGEDSP WMRMFRNARV KLG
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