Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1264 |
Symbol | |
ID | 4017532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1476034 |
End bp | 1476765 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637955260 |
Product | response regulator receiver |
Protein accession | YP_562273 |
Protein GI | 91792622 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000227049 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTAT TACTGGTTGA AGATGACATA GCCCTGCAGC AAAACCTTAA GCAGCATCTG CAAAATGCCA ACTATTCCTT GGATATCGCC TCAGACGGAG AACTTGGCTT GTATCAAGGG TTAGAGTTTC CCTATGACGC CGCCATTATA GACATTGGTC TGCCAAAGCT TGATGGGATA AGCCTTATCA AAACCTTAAG GGAGCGCCAG GTGAGCTACC CTATCTTGGT GCTTACCGCC AGAGACAGTT GGCAAGATAA AGTCAGCGGT CTTGACGCTG GCGCCGATGA TTATCTGACT AAACCCTTTC ACCCAGAAGA GTTATTGGCC AGAATGAAAG CCCTTATTCG CCGCGCGGCG GGCAAAGCTA GCTCCTTGGT GAGTAATGGC CCCTTTAGCG TGAACCTTAC CAGCTTGGAG GTTAAACGCC ATGAGGTGCT TGTCAACCTC AGCAGCTCTG AATACAAGCT GTTTGAGTTT TTAATGCTCC ACCCAGGGGA GGTTCAATCA AAATCCGTAT TGACGGAACA TATTTACGAT CAAGACTTTG ATTTAGACTC CAACGTCATC GAAGTATTTA TCCGCCGTTT AAGAAAAAAA CTCGACCCTG ATAACCAATA TCAGCTGATT GAGACACTGC GCGGCCAAGG TTATCGGTTA AATCCATTCT TACAAGCCGC TCCCTCGTTA GAGCAGACTT CTGGATCTCA GGTCAAAGCA GATGACGAAT AA
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Protein sequence | MRLLLVEDDI ALQQNLKQHL QNANYSLDIA SDGELGLYQG LEFPYDAAII DIGLPKLDGI SLIKTLRERQ VSYPILVLTA RDSWQDKVSG LDAGADDYLT KPFHPEELLA RMKALIRRAA GKASSLVSNG PFSVNLTSLE VKRHEVLVNL SSSEYKLFEF LMLHPGEVQS KSVLTEHIYD QDFDLDSNVI EVFIRRLRKK LDPDNQYQLI ETLRGQGYRL NPFLQAAPSL EQTSGSQVKA DDE
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