Gene Sden_1264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1264 
Symbol 
ID4017532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1476034 
End bp1476765 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content47% 
IMG OID637955260 
Productresponse regulator receiver 
Protein accessionYP_562273 
Protein GI91792622 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000227049 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTAT TACTGGTTGA AGATGACATA GCCCTGCAGC AAAACCTTAA GCAGCATCTG 
CAAAATGCCA ACTATTCCTT GGATATCGCC TCAGACGGAG AACTTGGCTT GTATCAAGGG
TTAGAGTTTC CCTATGACGC CGCCATTATA GACATTGGTC TGCCAAAGCT TGATGGGATA
AGCCTTATCA AAACCTTAAG GGAGCGCCAG GTGAGCTACC CTATCTTGGT GCTTACCGCC
AGAGACAGTT GGCAAGATAA AGTCAGCGGT CTTGACGCTG GCGCCGATGA TTATCTGACT
AAACCCTTTC ACCCAGAAGA GTTATTGGCC AGAATGAAAG CCCTTATTCG CCGCGCGGCG
GGCAAAGCTA GCTCCTTGGT GAGTAATGGC CCCTTTAGCG TGAACCTTAC CAGCTTGGAG
GTTAAACGCC ATGAGGTGCT TGTCAACCTC AGCAGCTCTG AATACAAGCT GTTTGAGTTT
TTAATGCTCC ACCCAGGGGA GGTTCAATCA AAATCCGTAT TGACGGAACA TATTTACGAT
CAAGACTTTG ATTTAGACTC CAACGTCATC GAAGTATTTA TCCGCCGTTT AAGAAAAAAA
CTCGACCCTG ATAACCAATA TCAGCTGATT GAGACACTGC GCGGCCAAGG TTATCGGTTA
AATCCATTCT TACAAGCCGC TCCCTCGTTA GAGCAGACTT CTGGATCTCA GGTCAAAGCA
GATGACGAAT AA
 
Protein sequence
MRLLLVEDDI ALQQNLKQHL QNANYSLDIA SDGELGLYQG LEFPYDAAII DIGLPKLDGI 
SLIKTLRERQ VSYPILVLTA RDSWQDKVSG LDAGADDYLT KPFHPEELLA RMKALIRRAA
GKASSLVSNG PFSVNLTSLE VKRHEVLVNL SSSEYKLFEF LMLHPGEVQS KSVLTEHIYD
QDFDLDSNVI EVFIRRLRKK LDPDNQYQLI ETLRGQGYRL NPFLQAAPSL EQTSGSQVKA
DDE