Gene Sden_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1260 
SymbolengA 
ID4017475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1471210 
End bp1472685 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content48% 
IMG OID637955256 
ProductGTP-binding protein EngA 
Protein accessionYP_562269 
Protein GI91792618 
COG category[R] General function prediction only 
COG ID[COG1160] Predicted GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03594] ribosome-associated GTPase EngA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00475437 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCTG TAGTGGCCCT TGTAGGGCGA CCTAACGTCG GCAAATCGAC ATTGTTTAAT 
CGTCTGACTC GCACACGTGA TGCGCTGGTT GCCGATTTTC CAGGTTTAAC TCGTGACCGC
AAGTATGGCA GAGCGTTTTT ATCTGGCTAT GAATTTATTG TGGTTGATAC CGGCGGTATC
GATGGCTCAG AAGAAGGGAT CGAAACCAAG ATGGCTGAGC AGTCCTTGGC TGCCATCGAA
GAAGCGGATG TGGTGTTGTT CTTAACTGAC GCTCGCGCCG GATTAACCTC TGCAGATCTT
GCGATTGCAC AGCATTTACG TAGCCGTGAT AAGACGACTT TCGTGGTTGC CAATAAAGTC
GATGGTATCG ATGCTGACTC TGTCTGCGGT GAATTTTGGG CACTGGGTTT AGGTGAAGTG
TACCAGATGG CAGCGGCCCA AGGTCGCGGC GTGACCAATA TGATCGAGTA TGCATTGGCG
CCTTACGCTG AAGCCATGGG TTTGAATCGT GATGATGACG AACAAGCCAT TGAAGAAGAA
CGTGAATACA CCGAAGAAGA AGCTGAAGCC GAGCAGAAGC GTCTACAAGA CTTGCCTATC
AAGCTTGCCA TTATTGGTAA GCCAAACGTG GGCAAATCGA CCTTAATCAA CCGTATTCTA
GGTGAAGAGC GGGTGGTGGT GTATGACGCA CCGGGCACAA CCCGTGACAG TATTTACATT
CCAATGGAAC GTGAAGGCCG TGAATACGTG CTTATTGACA CAGCCGGTGT ACGTCGTCGC
AGCAAAGTGC ATGAAGTGAT TGAAAAATTC TCAGTCATCA AGACACTTAA AGCCGTTGAA
GATGCCAACG TGGTACTGCT GGTTGTCGAT GCCCGCGAAG GTATTGCCGA GCAAGACTTA
GGTTTATTGG GTTTCACCTT GAATGCGGGC CGTGCATTAG TCATCGCGGT TAACAAGTGG
GATGGCATAG ATCAAACGGT TAAGGACAGA GTGAAGAGCG AGCTTGATAG ACGCTTAGGC
TTTATCGACT TTGCCAAAAT TCACTTTATT TCTGCGCTGC ACGGCACGGG TGTTGGTCAT
TTATATGAGT CAATCGAAGA AGCTTATGAC AGTGCGACAC GCCGCGTCAG TACTTCTATG
TTGACTCGTG TGATGCAAAT GTCACAGGAC GATCATCAGC CACCTCTGGT TAATGGTCGC
CGTGTTAAGC TTAAATATGC CCACGCCGGT GGTTATAACC CACCTATTAT CGTGGTTCAT
GGTAATCAGG TGAGCAAGCT GCCTGATTCA TACAAGCGTT ATATGATGAA TTACTTCCGC
CGTTCATTGA AAGTCGTTGG TACCCCAATT CAGATCCGTT TCCAAGAAGG TGATAACCCC
TTCGAAGGTA AGGTGGATAA ATTAACTATG GGTCAAGAGC GTCGTCGTAA GCGTGCCTTA
AGCCATATTA ATGACAGAAA GACCAAAGGC GAATAA
 
Protein sequence
MIPVVALVGR PNVGKSTLFN RLTRTRDALV ADFPGLTRDR KYGRAFLSGY EFIVVDTGGI 
DGSEEGIETK MAEQSLAAIE EADVVLFLTD ARAGLTSADL AIAQHLRSRD KTTFVVANKV
DGIDADSVCG EFWALGLGEV YQMAAAQGRG VTNMIEYALA PYAEAMGLNR DDDEQAIEEE
REYTEEEAEA EQKRLQDLPI KLAIIGKPNV GKSTLINRIL GEERVVVYDA PGTTRDSIYI
PMEREGREYV LIDTAGVRRR SKVHEVIEKF SVIKTLKAVE DANVVLLVVD AREGIAEQDL
GLLGFTLNAG RALVIAVNKW DGIDQTVKDR VKSELDRRLG FIDFAKIHFI SALHGTGVGH
LYESIEEAYD SATRRVSTSM LTRVMQMSQD DHQPPLVNGR RVKLKYAHAG GYNPPIIVVH
GNQVSKLPDS YKRYMMNYFR RSLKVVGTPI QIRFQEGDNP FEGKVDKLTM GQERRRKRAL
SHINDRKTKG E