| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1259 |
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| Symbol | |
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| ID | 4017474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1469941 |
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| End bp | 1471128 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955255 |
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| Product | outer membrane protein assembly complex subunit YfgL |
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| Protein accession | YP_562268 |
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| Protein GI | 91792617 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0514835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCCT TGTATAAGAA TTTACTGGCC GCAGGGCTCA GTATTGCGCT GGTTACGGCT
TGTTCATCAA ATGATGTTGA AGAAGAGCTC GTCAGTGAGT TAGTCGAAAT TGACGCTAAA
ATATTCCCTG AAGTTAGCTG GAGTGAAAGC CTAGGTGATG GGGTTGAAGA TTACTATTCT
CGCCTCAAGC CTGTGGTGCG CTATGGCAAG ATATTCGCCG CAGACCGCAG TGGTGAAGTT
GCTGCTTTCG ATGAAGCCAG TGGCGAGACT GTGTGGACTA AAGACTTTGC CGATGAATTT
GGTGATAGTT TACTGTCAAA GTCTAAAGGC GTACGTTTAG CGGCAGGTGT TGTGGCTGCG
CGCAATAAAG TCTTTGTTGG CGGTGAGAGC GGCCTGTTAG TGGCATTAAA TGCCGATGAT
GGCGCTACCA TTTGGTCCGT TGTTGCTGGC GGTGAATTGC TGTCTGCACC TACGGTTGCC
GAAGACGTTG TTGTGGTTAA CACAAGTAAA GGCACTTTCG AAGCGTACAA TATCGATGAC
GGCACTCGGC TTTGGAGCTA TGAAATGCAG TTGCCTAAGT TGACGCTCAG AGGCACAAGC
TCTGCAAGCT ATGAAGCGGG CGGTTTCTTC TTAGGTACCG CGGACGGCAA AATTGCTGTG
GTCGTTAAAA AGAATGGTCA AGCAGCGTGG GAGCAGCCAA TTTATGCGCC AACGGGGGGT
AATGAATTTA CTCGCATGGC CGATGTGGAC ATGACACCGT TAATTTCTGG CGATAATTTA
TACGCAGTCA GTTACAATGG TAACTTGGTA TCGATGGAAA TGCGCAGTGG ACGCACCATT
TGGACCCGTA AGTATTCGAG CTTCAATGAG TTAGCCTCAG CAGGCTTAAG TTTATACTTG
GTTGATGATC GTAGCCGTGT CTATGCCGTC GATAAGCGCA ATGGCTTAGA GCTATGGAGT
AATTCGACAC TTAAAAACCG CGAGCTGACT TCTCCAGCGG TTGTCGGTGA ATACGTAATA
GTAGGCGACT TGGAAGGCTA TTTACACTTT ATTAGTCGTG ACACGGGTGA GGTAGTAGGC
CGTGTTCAAG TCGACAGTGA TGGATTATTT AGTCAGCCTG AAGTGGTTGA TGGTAAAATT
TATGTTCAAG GCCGTAGCGG CATGATCGCT CAGGTAATCC TTCCATAA
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| Protein sequence | MQSLYKNLLA AGLSIALVTA CSSNDVEEEL VSELVEIDAK IFPEVSWSES LGDGVEDYYS
RLKPVVRYGK IFAADRSGEV AAFDEASGET VWTKDFADEF GDSLLSKSKG VRLAAGVVAA
RNKVFVGGES GLLVALNADD GATIWSVVAG GELLSAPTVA EDVVVVNTSK GTFEAYNIDD
GTRLWSYEMQ LPKLTLRGTS SASYEAGGFF LGTADGKIAV VVKKNGQAAW EQPIYAPTGG
NEFTRMADVD MTPLISGDNL YAVSYNGNLV SMEMRSGRTI WTRKYSSFNE LASAGLSLYL
VDDRSRVYAV DKRNGLELWS NSTLKNRELT SPAVVGEYVI VGDLEGYLHF ISRDTGEVVG
RVQVDSDGLF SQPEVVDGKI YVQGRSGMIA QVILP
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