Gene Sden_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1258 
Symbol 
ID4017473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp1469310 
End bp1469930 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID637955254 
Producttetratricopeptide TPR_2 
Protein accessionYP_562267 
Protein GI91792616 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0524516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAATTT ATAGCACAGA AGAACAACAA GTAGATGCTA TCAAGCAGTT TTGGAAAGAT 
TATGGCGTGT CGATTGCGCT GGGCGCCGTA GTGGGCCTAG GCGGTTTATA TGGGTGGAAT 
ACCTATTCAG AGCACAAGGT TGCCAGTGCT GAGCTTGCCT CAGAATCCTT TCAATCTATC 
GCGCTGGATG CGGAAAATAG CCCCAATGTG ATGATGGCTG CCGTCGAGTT TGAAAAAAAT 
CACGATCAAC AGGGCTACCA AGCTTTGTTG CAGTTTATGT TGGCAAAATC CGCTGTTGAA 
GCGGGTGATT TGGAAAAAGC CGAACAAGCT TATACGAAAG TGATAGCCGC AAAACCTGCA 
GCAGGCCTTG ATATGATAGC GGCACTGCGT TTATCACGAG TGCAAGCAGA ACAAGGTAAC 
TTGGGCATGG CACTGGCCAC GCTTGAACAC GTAACAGACA GCGCTTATGC TGCTCAACGT 
GATGAATTGA AAGGCGATTT CTACGCCCGC CAAGGTGAGT TTGATAAAGC AAAAAATGCC 
TATCAAGCCG CAGTCACCTT AGGTGGCACC TTAGCAAGCC CCGCGCTGCA AATGAAATTA 
GACAGCCTTA ACAAAGCATA A
 
Protein sequence
MEIYSTEEQQ VDAIKQFWKD YGVSIALGAV VGLGGLYGWN TYSEHKVASA ELASESFQSI 
ALDAENSPNV MMAAVEFEKN HDQQGYQALL QFMLAKSAVE AGDLEKAEQA YTKVIAAKPA 
AGLDMIAALR LSRVQAEQGN LGMALATLEH VTDSAYAAQR DELKGDFYAR QGEFDKAKNA 
YQAAVTLGGT LASPALQMKL DSLNKA