Gene Sden_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1252 
Symbol 
ID4017467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1461790 
End bp1463532 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content47% 
IMG OID637955248 
Product5'-nucleotidase-like protein 
Protein accessionYP_562261 
Protein GI91792610 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACACTC GTTATACACT CAGCCTTGCC CATATCAATG ACACCCACTC AAACTTTGAA 
GCCAGTGCCG TGCAATTCTC ATTAGCGCAT CAAGGGTGTC AATATAAAAT CAACGCTAAA
TCAGGTGGAT ACGCTAGATT ATCATTTCAA ATCAATCAGG CTAGGCAAGC GGCTAAAGCA
AAAAGTAATG CCTTCTTGTT TCTCCATGCC GGTGACAGTT TCCAAGGCAC ATTGTATTTC
AGAGAATTTC AAGGTTCGGC CAACGCCCAT TTATTGAATT TACTCGCGCC TGACGCCATG
GTGCTTGGCA ATCATGAAAT CGATGCGGGT AATGGCCCAG TGCAGGCCTT TTTAAATCGC
ATTGAGTTTC CTTTGCTTGC TGGCAATATG GATTTAAGCC AAGAAGACTT AACCAAACCG
GGCCGGCTCA ATGGTCACCC TATGCTCTAT GATTATGATG CCGAACTTAA GCTTGCTAAG
GTCATTGTTA AACCTTTCCA TGATACCCAG CTTGCTATCG TGGGGATAAC CTTAGATCAG
ATGGCGTTAA TCGCCCGCCC CGATCCCGAT ACCCATTTTA TCGATGCCAT CGCCACCACT
GAGCGCACTG TAAAACACCT TAAAGCTCAG GGAATACATC ACATTATAGT GCTGAGTCAT
TTAGGCCTTG ACCAAGACAG GGAACTTGCC AATCTTGTCC CCGATATCAG CTTAATTGTG
GGCGGCCATT CACATACGCT GCAAGGAGAC TTTAATGTCC TTGGGCTGAG TCAATTGGCC
TATGGTGAAC GCCAAGGTGG CACAGCCATA GTGCATGCAG GTAAATACGC TGAAACATTA
GGTCTTGCAG AAATTGAATT TGATCAAAGT GGTAAGCTTA CATCCCTTAG TGGCAACAAC
TTCTTTATGT TAGATGATGA GCTTGAGATC ACGACCCTAG CAGATGAAGC TGTGCCTAAT
CATATCCAGC ACCAACTTGA AACTTTACTG CGAAACCACC CCGGCATACT GGGTAATGAG
CAAGATGATA ATTTAGATAG CGTTATTCAG ACTCAATATA GACCGGCATT GGATGCCCTT
GAATCACAAG TGCTGGGCCA TGTGCCCAGA GACTTTATCC ATACTCGCCT GCCGAGCCGT
CATCATCCCC ATGGCAGTGA AATCGCGCCT TGGGTCAGTC GCAGCATGTA TAAGATGGCC
AAAAAGCAGA TCCCAGAGCT TGATTTCGCG CTGCATAATG CCGGCGGTGT TCGCCAGTCT
TTGACCAGAG GACAACTCAC CATGGCCGAC GTATTAGGGC GAATTTTGCC CTTCGAACTG
CCTTTAGTGG CCTACCAGCT TAAAGGTGCC CATCTTTTTG ATATATTAGA AAGCTGCATC
AATGGCGCCA CCAATAACGA TGCCACGGGC ACAGGTGCAG GTAGCTTCCC CTACCCCTAT
GGCATTCGCT ATTTTTATGA TGGCACTCAA GCTCAAGGAC AGCGCATCAC TAAGATAGAG
CTGCATAAGC AAGGTCAGTG GCGAGCCATT TGCCCAGACA GCCTTTATAT TGGGGTTTCG
ACGGCTTACA CGGCATCGGG CAAGGAAGGT TATCATGGAC TACTGAATGC GTTGTGGTTC
AAAAACTTAC CTAAAACCAC CCTACCTGAA GCCTTTGTAG ACTTTATCGG TGAGAAAGGA
CATTTATTAA CTGAAAACTT CCCCCCCAAC GTGCATTACA TCAGACATGC CGTCAAAGGT
TAA
 
Protein sequence
MNTRYTLSLA HINDTHSNFE ASAVQFSLAH QGCQYKINAK SGGYARLSFQ INQARQAAKA 
KSNAFLFLHA GDSFQGTLYF REFQGSANAH LLNLLAPDAM VLGNHEIDAG NGPVQAFLNR
IEFPLLAGNM DLSQEDLTKP GRLNGHPMLY DYDAELKLAK VIVKPFHDTQ LAIVGITLDQ
MALIARPDPD THFIDAIATT ERTVKHLKAQ GIHHIIVLSH LGLDQDRELA NLVPDISLIV
GGHSHTLQGD FNVLGLSQLA YGERQGGTAI VHAGKYAETL GLAEIEFDQS GKLTSLSGNN
FFMLDDELEI TTLADEAVPN HIQHQLETLL RNHPGILGNE QDDNLDSVIQ TQYRPALDAL
ESQVLGHVPR DFIHTRLPSR HHPHGSEIAP WVSRSMYKMA KKQIPELDFA LHNAGGVRQS
LTRGQLTMAD VLGRILPFEL PLVAYQLKGA HLFDILESCI NGATNNDATG TGAGSFPYPY
GIRYFYDGTQ AQGQRITKIE LHKQGQWRAI CPDSLYIGVS TAYTASGKEG YHGLLNALWF
KNLPKTTLPE AFVDFIGEKG HLLTENFPPN VHYIRHAVKG