Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1252 |
Symbol | |
ID | 4017467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1461790 |
End bp | 1463532 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637955248 |
Product | 5'-nucleotidase-like protein |
Protein accession | YP_562261 |
Protein GI | 91792610 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACACTC GTTATACACT CAGCCTTGCC CATATCAATG ACACCCACTC AAACTTTGAA GCCAGTGCCG TGCAATTCTC ATTAGCGCAT CAAGGGTGTC AATATAAAAT CAACGCTAAA TCAGGTGGAT ACGCTAGATT ATCATTTCAA ATCAATCAGG CTAGGCAAGC GGCTAAAGCA AAAAGTAATG CCTTCTTGTT TCTCCATGCC GGTGACAGTT TCCAAGGCAC ATTGTATTTC AGAGAATTTC AAGGTTCGGC CAACGCCCAT TTATTGAATT TACTCGCGCC TGACGCCATG GTGCTTGGCA ATCATGAAAT CGATGCGGGT AATGGCCCAG TGCAGGCCTT TTTAAATCGC ATTGAGTTTC CTTTGCTTGC TGGCAATATG GATTTAAGCC AAGAAGACTT AACCAAACCG GGCCGGCTCA ATGGTCACCC TATGCTCTAT GATTATGATG CCGAACTTAA GCTTGCTAAG GTCATTGTTA AACCTTTCCA TGATACCCAG CTTGCTATCG TGGGGATAAC CTTAGATCAG ATGGCGTTAA TCGCCCGCCC CGATCCCGAT ACCCATTTTA TCGATGCCAT CGCCACCACT GAGCGCACTG TAAAACACCT TAAAGCTCAG GGAATACATC ACATTATAGT GCTGAGTCAT TTAGGCCTTG ACCAAGACAG GGAACTTGCC AATCTTGTCC CCGATATCAG CTTAATTGTG GGCGGCCATT CACATACGCT GCAAGGAGAC TTTAATGTCC TTGGGCTGAG TCAATTGGCC TATGGTGAAC GCCAAGGTGG CACAGCCATA GTGCATGCAG GTAAATACGC TGAAACATTA GGTCTTGCAG AAATTGAATT TGATCAAAGT GGTAAGCTTA CATCCCTTAG TGGCAACAAC TTCTTTATGT TAGATGATGA GCTTGAGATC ACGACCCTAG CAGATGAAGC TGTGCCTAAT CATATCCAGC ACCAACTTGA AACTTTACTG CGAAACCACC CCGGCATACT GGGTAATGAG CAAGATGATA ATTTAGATAG CGTTATTCAG ACTCAATATA GACCGGCATT GGATGCCCTT GAATCACAAG TGCTGGGCCA TGTGCCCAGA GACTTTATCC ATACTCGCCT GCCGAGCCGT CATCATCCCC ATGGCAGTGA AATCGCGCCT TGGGTCAGTC GCAGCATGTA TAAGATGGCC AAAAAGCAGA TCCCAGAGCT TGATTTCGCG CTGCATAATG CCGGCGGTGT TCGCCAGTCT TTGACCAGAG GACAACTCAC CATGGCCGAC GTATTAGGGC GAATTTTGCC CTTCGAACTG CCTTTAGTGG CCTACCAGCT TAAAGGTGCC CATCTTTTTG ATATATTAGA AAGCTGCATC AATGGCGCCA CCAATAACGA TGCCACGGGC ACAGGTGCAG GTAGCTTCCC CTACCCCTAT GGCATTCGCT ATTTTTATGA TGGCACTCAA GCTCAAGGAC AGCGCATCAC TAAGATAGAG CTGCATAAGC AAGGTCAGTG GCGAGCCATT TGCCCAGACA GCCTTTATAT TGGGGTTTCG ACGGCTTACA CGGCATCGGG CAAGGAAGGT TATCATGGAC TACTGAATGC GTTGTGGTTC AAAAACTTAC CTAAAACCAC CCTACCTGAA GCCTTTGTAG ACTTTATCGG TGAGAAAGGA CATTTATTAA CTGAAAACTT CCCCCCCAAC GTGCATTACA TCAGACATGC CGTCAAAGGT TAA
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Protein sequence | MNTRYTLSLA HINDTHSNFE ASAVQFSLAH QGCQYKINAK SGGYARLSFQ INQARQAAKA KSNAFLFLHA GDSFQGTLYF REFQGSANAH LLNLLAPDAM VLGNHEIDAG NGPVQAFLNR IEFPLLAGNM DLSQEDLTKP GRLNGHPMLY DYDAELKLAK VIVKPFHDTQ LAIVGITLDQ MALIARPDPD THFIDAIATT ERTVKHLKAQ GIHHIIVLSH LGLDQDRELA NLVPDISLIV GGHSHTLQGD FNVLGLSQLA YGERQGGTAI VHAGKYAETL GLAEIEFDQS GKLTSLSGNN FFMLDDELEI TTLADEAVPN HIQHQLETLL RNHPGILGNE QDDNLDSVIQ TQYRPALDAL ESQVLGHVPR DFIHTRLPSR HHPHGSEIAP WVSRSMYKMA KKQIPELDFA LHNAGGVRQS LTRGQLTMAD VLGRILPFEL PLVAYQLKGA HLFDILESCI NGATNNDATG TGAGSFPYPY GIRYFYDGTQ AQGQRITKIE LHKQGQWRAI CPDSLYIGVS TAYTASGKEG YHGLLNALWF KNLPKTTLPE AFVDFIGEKG HLLTENFPPN VHYIRHAVKG
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