Gene Sden_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1251 
Symbol 
ID4017466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1461228 
End bp1461785 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content47% 
IMG OID637955247 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_562260 
Protein GI91792609 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCAT CTCAGTATCG ACTCGTTGCC TATAAAAAAA ATGAAGCGAG TCAATACGCT 
GCGCAGATAA GTACCTTGTT CCATCACGCC GTGAGCAGTA TTCGCCACCC TAGGTATAAT
CAGGCTCAAT TACAGGCTTG GTCAAAGGCG CCCCGTTCGG CGAGGCATTG GCTCAATCAG
TTAAAGTACG GCAAAACTTG GCTGATACTC GAACTTGCGG CGCCAATCAC AGCAGAAAGC
GAAAACGAAA CGGCTTACAA TAGTGGTAAA TTGGTGGGTT TTATCAGTTT AGAGACTCAA
TTTAAGCGCC AAGGTTATAT CAGCCATTTA TATGTCCATC CACTGGCACA AGGGCTGCAC
CTTGGGAGCA AGTTGATATT GTGCGCGCAG AATTGGGCCT CAGCAGAAGG CTATAAGCAG
CTCAGCACGG ATGCGTCTTA TCTGTCCAAA GGGTTATTCG AACGCCATGG CTTTATTCAC
CAAGGTAAGA GTTTTCAAAA TAAGTTAGCC CAAGTCATCA CAGGCTTTGA GATGACAAAG
TCCCTCTGCC AGCCTTGA
 
Protein sequence
MQASQYRLVA YKKNEASQYA AQISTLFHHA VSSIRHPRYN QAQLQAWSKA PRSARHWLNQ 
LKYGKTWLIL ELAAPITAES ENETAYNSGK LVGFISLETQ FKRQGYISHL YVHPLAQGLH
LGSKLILCAQ NWASAEGYKQ LSTDASYLSK GLFERHGFIH QGKSFQNKLA QVITGFEMTK
SLCQP