| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1246 |
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| Symbol | |
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| ID | 4017461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1456275 |
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| End bp | 1457600 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955242 |
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| Product | isocitrate lyase |
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| Protein accession | YP_562255 |
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| Protein GI | 91792604 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0481368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTAAGG TAGAAGCAGG GTTAACTCGT CAGCAGCAGA TCGATGCGAT TAAAAAAGAT
TGGGCTGAGA ATCCACGTTG GAAGCATGTG AAGCGTCCAT TTACGGCTGA AGAAGTGGTT
GCACTACGTG GATCTATCGT GCCAGAAAAC ACCATAGCTA AACGTGGCGC GGCTAAATTA
TGGGAGCTGG TGAATGGCGG AGCTAAAAAA GGCTATGTGA ACTCACTAGG TGCATTGACT
GGCGGCCAAG CCGTGCAGCA AGCCAAAGCC GGTATCGAAG CGATTTACCT TTCAGGTTGG
CAGGTTGCCG CTGACGCTAA CTTAGCGGGC ACCATGTATC CAGACCAATC TTTGTATCCT
GCAAACTCAG TTCCAGCCGT GGTGAGCCGT ATTAACAACT CATTCCGCCG TGCTGACCAA
ATTCAATGGG GCAAAGAAAT TAATCCTGGT GATAAAAATT ATACCGACTA CTTCCTACCA
ATCGTTGCCG ATGCAGAAGC GGGTTTTGGC GGCGTACTCA ATGCCTTCGA ACTGATGAAG
TCTATGATCG ATGCGGGCGC TGCTGGGGTT CACTTTGAAG ACCAATTAGC ATCAGTGAAG
AAATGTGGCC ACATGGGCGG CAAGGTACTA GTACCGACTC AAGAAGCGGT GCAAAAGCTA
GTAGCGGCGC GTCTAGCGGC CGATGTAAGC GGCGTTGATA CGCTAGTTAT CGCTCGTACC
GATGCTAATG CTGCTGATTT GATGACTTCA GATTGTGATG CATATGACCG TGACTTTGTT
ACAGGCGAGC GTACCAGTGA AGGTTTCTAC CGCGTTAAAG CGGGGCTTGA CCAAGCGATT
TCTCGCGGTC TTGCCTATGC GCCATACGCA GATTTAATCT GGTGTGAAAC CGCTAAGCCT
TGCCTTGAAG AAGCGAAGAA ATTTGCTGAA GCGATTCACG CACAGTACCC AGATCAATTG
CTGGCTTATA ACTGTTCACC TTCGTTTAAC TGGAAGAAGA ACTTGGATGA CGCAACAATT
GCAAAATTCC AACAAGAGCT ATCAAACATG GGTTACAAGT ACCAATTCAT CACCTTAGCT
GGCATTCATA ACATGTGGTA CAACATGTTC GATTTAGCCT ATGACTATGC TCGCGGTGAA
GGCATGAAGC ACTATGTTGA GAAAGTTCAG GAAGTTGAAT TTGCTGCTGC AGAGAAAGGT
TATACCTTTG TGTCTCACCA GCAAGAAGTG GGCACAGGCT ACTTCGACCA AGTGACGACC
TGTATCCAAG GTGGTAAGTC TTCAGTAACG GCACTAACGG GTTCAACTGA AGAAGAACAG
TTTTAA
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| Protein sequence | MSKVEAGLTR QQQIDAIKKD WAENPRWKHV KRPFTAEEVV ALRGSIVPEN TIAKRGAAKL
WELVNGGAKK GYVNSLGALT GGQAVQQAKA GIEAIYLSGW QVAADANLAG TMYPDQSLYP
ANSVPAVVSR INNSFRRADQ IQWGKEINPG DKNYTDYFLP IVADAEAGFG GVLNAFELMK
SMIDAGAAGV HFEDQLASVK KCGHMGGKVL VPTQEAVQKL VAARLAADVS GVDTLVIART
DANAADLMTS DCDAYDRDFV TGERTSEGFY RVKAGLDQAI SRGLAYAPYA DLIWCETAKP
CLEEAKKFAE AIHAQYPDQL LAYNCSPSFN WKKNLDDATI AKFQQELSNM GYKYQFITLA
GIHNMWYNMF DLAYDYARGE GMKHYVEKVQ EVEFAAAEKG YTFVSHQQEV GTGYFDQVTT
CIQGGKSSVT ALTGSTEEEQ F
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